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Protein Overview: CE39320

General Information:
Name(s) found: CE39320 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00015788 status:Partially_confirmed UniProt:Q8WSW2 protein_id:CCD64572.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 385 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: electron transport [IEALink to PubMed article]
    tetrahydrofolate metabolic process [IEALink to PubMed article]
    Molecular Function: oxidoreductase activity [IEALink to PubMed article]
    sarcosine oxidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGKAYDVIV VGAGIFGSCT AYHCQRLGLR TLLLEQYSLG HSNGSSHGKS RIIRYAHTDP  60
   61 EYVPLVGDSY LQIEELEKKR GEKLWNKLGL LWAATGNQVD SISGHLKKHN IDHEVLPGTK 120
  121 ITERYPQFKF DDKWTALIDP MGGVIYANKW LKAFQEEFIT LGGTIQDNEP VISYGETDNV 180
  181 IVNVKTSTGE YKTNKIIFTV GCWITKFFPN VNFQIKPISL AVCYWNAKDE KNNHLLDEKH 240
  241 FPVVIAKNLE KKEYFFALPD TDYPGAIKLV LDEGDDLAGD LSHPTKNNQE LVTIPGSFIK 300
  301 DHIPVIDGSS PYKVDQCKYT NSPDHHYLIG PVSSENSKIL VGGCGSGSGF KTAPGIGRSL 360
  361 AEMAAGKSTT VDVTFFSPSR FETPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..385] PSI-BLAST 54.39794 Sarcosine oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.61125987248836 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.07245967881566 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.943208146517927 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  0.681230241795345 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  0.397770205910041 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.58

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle