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Protein Overview: snf-11

General Information:
Name(s) found: snf-11 / CE40659 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00004910 locus:snf-11 Transporter status:Confirmed UniProt:G5EF43 protein_id:CAA98519.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 610 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: neurotransmitter transport [IEALink to PubMed article]
    Molecular Function: neurotransmitter:sodium symporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEATSVAER EQWSSWADFI MSCIGYAIGL GNVWRFPYLC YQNGGGAFLI PYCISLVFCG  60
   61 APLFILETSW GQLMSVGGLG MFKICPIFKG VGIAAAVMAF WLNIYYIVVL SWAATYLYNS 120
  121 FTMSDVPWKN CDHAWNTPNC RSEYVKIPCD SNRTIAEFFN VKVLTHDHIH EYKKQFFVGE 180
  181 KMNWTVCSAA DLSVVSPVKE FWNHRVLGIS SGLENPGGIR WDLALFLLLV WIICYLCIFK 240
  241 GVKWTGKVVY ITASFPYMML FCLLIRGLTL EGAGVGLEFY LKPDFSKLLE SKVWVDAVTQ 300
  301 VFFSYGLGLG ALVALGSYNK FNNNVYKQAL TVCFVNSGTS VFAGFVIFSF IGFMATQQEK 360
  361 SVAEVAQAGP GLLFLAYPSG ILQLPYTQFW SCLFFLMVLF LGVDSQFCTM EGFFTAIIDE 420
  421 FPQIRRKKYG REIFVGVICV ISYLIGLTTV TEGGFYVFQL FDFYAASGWA LLWLLFFECI 480
  481 AISWSLGIDR WYEHMKSMIG YYPSAWWKFC WVFATPSVCF GVLLFGLIKY QPLRIDAYNY 540
  541 DYPVWGHIFG WFLSLSSMLC IPGYAIWIWF KTPGTVQEKI KLLCRPDIEI KGAMENAENL 600
  601 ELVEDFQNAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..610] PSI-BLAST 50.0 Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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