| Protein: | snf-11 |
| Organism: | Caenorhabditis elegans |
| Length: | 610 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for snf-11.
| Description | E-value | Query Range |
Subject Range |
|
|
574.0 | [0..2] | [606..290] |
|
Region A: Residues: [1-610] |
1 11 21 31 41 51
| | | | | |
1 MVEATSVAER EQWSSWADFI MSCIGYAIGL GNVWRFPYLC YQNGGGAFLI PYCISLVFCG 60
61 APLFILETSW GQLMSVGGLG MFKICPIFKG VGIAAAVMAF WLNIYYIVVL SWAATYLYNS 120
121 FTMSDVPWKN CDHAWNTPNC RSEYVKIPCD SNRTIAEFFN VKVLTHDHIH EYKKQFFVGE 180
181 KMNWTVCSAA DLSVVSPVKE FWNHRVLGIS SGLENPGGIR WDLALFLLLV WIICYLCIFK 240
241 GVKWTGKVVY ITASFPYMML FCLLIRGLTL EGAGVGLEFY LKPDFSKLLE SKVWVDAVTQ 300
301 VFFSYGLGLG ALVALGSYNK FNNNVYKQAL TVCFVNSGTS VFAGFVIFSF IGFMATQQEK 360
361 SVAEVAQAGP GLLFLAYPSG ILQLPYTQFW SCLFFLMVLF LGVDSQFCTM EGFFTAIIDE 420
421 FPQIRRKKYG REIFVGVICV ISYLIGLTTV TEGGFYVFQL FDFYAASGWA LLWLLFFECI 480
481 AISWSLGIDR WYEHMKSMIG YYPSAWWKFC WVFATPSVCF GVLLFGLIKY QPLRIDAYNY 540
541 DYPVWGHIFG WFLSLSSMLC IPGYAIWIWF KTPGTVQEKI KLLCRPDIEI KGAMENAENL 600
601 ELVEDFQNAI
|
| Detection Method: |  |
| Confidence: | 50.0 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
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