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Protein Overview: elt-1

General Information:
Name(s) found: elt-1 / CE39113 [WormBase]
Description(s) found:
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  • WBGene00001249 locus:elt-1 status:Confirmed UniProt:Q3S1J8 protein_id:CAJ30234.1 [WormBase]
  • gi|86575041|ref|NP_001033435.1| Erythroid-Like Transcription factor family member (elt-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|74834771|emb|CAJ30234.1| C. elegans protein W09C2.1a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • CE39113 WBGene00001249 locus:elt-1 elongation factor ELT status:Partially_confirmed TR:Q3S1J8 protein_id:CAJ30234.1 [wormpep150.fasta]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • 39113 WBGene00001249 locus:elt-1 elongation factor ELT status:Partially_confirmed TR:Q3S1J8 protein_id:CAJ30234.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE39113 WBGene00001249 locus:elt-1 elongation factor ELT status:Partially_confirmed UniProt:Q3S1J8_CAEEL protein_id:CAJ30234.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE39113 WBGene00001249 locus:elt-1 elongation factor ELT status:Partially_confirmed UniProt:Q3S1J8_CAEEL protein_id:CAJ30234.1| [wormORF-contam.fasta]
  • Erythroid-Like Transcription factor family member (elt-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein W09C2.1a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE39113 WBGene00001249 locus:elt-1 elongation factor ELT status:Partially_confirmed UniProt:Q3S1J8 protein_id:CAJ30234.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE39113 WBGene00001249 locus:elt-1 elongation factor ELT status:Confirmed UniProt:Q3S1J8 protein_id:CAJ30234.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE39113 WBGene00001249 locus:elt-1 status:Confirmed UniProt:Q3S1J8 protein_id:CAJ30234.1 [wormpep246-ecoli-contam.fasta]
  • Isoform of P28515, Erythroid-Like Transcription factor family OS=Caenorhabditis elegans GN=elt-1 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    oviposition [IMPLink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHYRDANYSI SRNKVNLHHE EFMLDGVVGG EDHDMQNTNE VRAELDSLLR LDPDTNSIID  60
   61 ALHISQPIEQ ENMDYEGKPV EFTLGTSSGG ASLAPTSSTT AASIAPFSYN TSATNYYNTT 120
  121 PSSYPMFLNY QYAGGTTVTT DMDAFSGMDM SMNNGVFGTQ NNPSYFYPTT QLNTYGYDTL 180
  181 AAATTASGIT VNNNQLNVNI VQGNGTIVPQ PITQNIISTV SNVQSSVPIN NSQPLTPTGL 240
  241 AGCSTSSGSS SASSSSANST STPKNTISKA NRSSGGANNS QFSTEDRECV NCGVHNTPLW 300
  301 RRDGSGNYLC NACGLYFKMN HHARPLVKPK KRQQNAQKRT GIECVNCRTN TTTLWRRNGE 360
  361 GHPVCNACGL YFKLHKVERP ITMKKDGIQT RNRKLSAKGS RRMKKENGGT PTSMGMPTTS 420
  421 SSISSGIELD QSGVWGMKNT QPMLMTPTAY AFPASNFYFN SIEDQLEYKT CPPMMVDFGG 480
  481 QMKNLNLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] PSI-BLAST 19.221849 RBP1
    2 View Details [169..262] deduced N/A No confident structure predictions are available.
    3 View Details [263..339] FFAS03 2.94 Erythroid transcription factor GATA-1
    4 View Details [340..389] PSI-BLAST 12.221849 Erythroid transcription factor GATA-1
    5 View Details [390..488] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  1.09202730533215 bayes_pls_golite062009
  • protein binding
    		•  0.607672767407822 bayes_pls_golite062009
    4
    Term Confidence Notes
  • binding
    		•  1.18770607371139 bayes_pls_golite062009
  • protein binding
    		•  0.699012253331291 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.1367607837242 bayes_pls_golite062009
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle