YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: prmt-6

General Information:
Name(s) found: prmt-6 / CE41359 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00016023 locus:prmt-6 status:Confirmed UniProt:O61833 protein_id:CCD65350.1 [WormBase]
  • gi|193205907|ref|NP_500168.2| hypothetical protein C23H5.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|154690533|gb|AAC17532.2| Hypothetical protein C23H5.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE41359 WBGene00016023 status:Confirmed UniProt:O61833_CAEEL protein_id:AAC17532.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • [wormORF-contam.fasta]
  • CE41359 WBGene00016023 status:Confirmed UniProt:O61833_CAEEL protein_id:AAC17532.2| [wormORF-contam.fasta]
  • CE41359 WBGene00016023 status:Confirmed TR:O61833 protein_id:AAC17532.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE41359 WBGene00016023 locus:prmt-6 status:Confirmed UniProt:O61833 protein_id:AAC17532.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE41359 WBGene00016023 locus:prmt-6 status:Confirmed UniProt:O61833 protein_id:CCD65350.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • PRotein arginine MethylTransferase OS=Caenorhabditis elegans GN=prmt-6 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 252 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: metabolic process [IEALink to PubMed article]
    ubiquinone biosynthetic process [IEALink to PubMed article]
    Molecular Function: methyltransferase activity [IEALink to PubMed article]
    2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDFPSEAYT EAQQKWLGRD HLITPTIKKA FGHILVGKEV LDVGCGNGHY SFDFLRWGAH  60
   61 KVFGVDNSEE MIQICKSSPD FENFNSKIDF LLGEVTNFHV DGASFDVATA FFVLQFLHKN 120
  121 DDVALAIQNI SRHLKSRGTF FGLIPNGVPG VRAPENMGLK LGAQIQKEPE SPFVDGEVVG 180
  181 INFYANGEVC GSSKIALHSR EFYEQCFKAA GFSQIEWIAP HFTDHAKNLL GEQFCFQFLN 240
  241 PPCDIMFKCV KM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..252] PSI-BLAST 18.09691 Crystal structure of Ubiquinone/menaquinone biosynthesis methyltransferase-related protein (tm1389) from THERMOTOGA MARITIMA at 2.35 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.723277178398499 bayes_pls_golite062009
  • transferase activity
    		•  0.64512166557639 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle