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Protein Overview: CE39235

General Information:
Name(s) found: CE39235 [WormBase]
Description(s) found:
Found 12 descriptions.
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  • WBGene00016524 status:Confirmed UniProt:Q9N5X5 protein_id:CCD67060.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 506 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: translation [IEALink to PubMed article]
    Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor [IEALink to PubMed article]
    ligase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWQCRRLAST SAAATVTQKQ RFRPVIGLEI HVQLNTLTKL FSRCPTSESS PNRRVDAFDM  60
   61 ATPGILPALN RQCVLRALKM ARILHCQVPK SSRFDRKHYF YADMPAGYQI TQNEKPIAKN 120
  121 GKFGFWVFDE RIEVPYWKEV EILQLQLEQD SGKTIHMTSQ AAPPTSLIDY NRAGCALVEI 180
  181 VTSPCFTTAI EAIRFVQILR LLLIHHAICD GELHRGHIRV DANVSLAKDD VWGTRTEIKN 240
  241 MNSIRTIHTA INYEIARQFE ILKNGGAVQN ETRAADSEGR TVSMRDKETE ETDYRFMVEP 300
  301 NLPQLKIHGK WLKEVEEELK CEGKADFEVL REDVGFDARS AVHIAEEPEL LSFVKRCIRY 360
  361 KAPTVTPVDI LYWMKELKTV MQRSKANYPP QSEFFARQFT TLLKFSSEHR LTRLRLLDLL 420
  421 RHYATDDDVM AGELEILIEE NRYWRIRAPA EIDEIVRKSM EKQEKLVEKC RSGHVKSFNR 480
  481 LRNSIIDSSN KCIELEDLEA SIRRLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..506] PSI-BLAST 1000.0 No description for 2df4B was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity
    		•  5.28014676041088 bayes_pls_golite062009
  • catalytic activity
    		•  1.08973967683802 bayes_pls_golite062009
  • ammonia ligase activity
    		•  0.978763138251862 bayes_pls_golite062009
  • glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
    		•  0.873485093374459 bayes_pls_golite062009
  • acid-ammonia (or amide) ligase activity
    		•  0.632807059205458 bayes_pls_golite062009
  • binding
    		•  0.601875498896385 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.545649763280687 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.0373860162850559 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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