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Protein Overview: CE38084

General Information:
Name(s) found: CE38084 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00019334 Putative ATP-dependent DNA helicase Q1 status:Confirmed UniProt:Q9TXJ8 protein_id:CCD61880.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 608 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA recombination [IEALink to PubMed article]
    SOS response [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    ATP-dependent helicase activity [IEALink to PubMed article]
    helicase activity [IEALink to PubMed article]
    ATP-dependent DNA helicase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVLLSKLS TELADLDGEI GQIDQQISQL RRKKSELTQK RQAIERKIEL KTNEDSDVVT  60
   61 DRWDRDGFPW SDEATKILKE QFHLEKFRPL QRAAINAVMS KEDAVVILST GGGKSLCYQL 120
  121 PALLANGLAL VVSPLISLVE DQILQLRSLG IDSSSLNANT SKEEAKRVED AITNKDSKFR 180
  181 LLYVTPEKLA KSKKMMNKLE KSLSVGFLKL IAIDEVHCCS QWGHDFRTDY SFLNVLKRQF 240
  241 KGVPILGLTA TATSNVLDDV KDMLGIQAAL TFRAGFNRSN LKYKVVQKPG SEDECTEEIA 300
  301 KTIKRDFAGQ TGIIYCLSRN DCEKVAKALK SHGIKAKHYH AYMEPVDRSG AHQGWISGKI 360
  361 QVIVATVAFG MGIDKPNVRF VIHHSLPKSI ENYYQESGRA GRDGQPATCI LYYRLADIFK 420
  421 QSSMVQQERT GIQNLYNMVR YAADSSTCRR VKLAEHFEEA WEPSWCQKQC DTCENGNGFV 480
  481 GTSSKESTDV SEAAKTTVRI IEEHLNSAKD GSGRITGNKL VELLTKKLKG SRNREFCEKL 540
  541 IVNLLLEGYL QEDFHYTVYS VISYVVIGSK WRVYNGKDAI KMRHVEESKS RKRKASSSVE 600
  601 EEDVMVLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..608] PSI-BLAST 93.69897 No description for 2v1xA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle