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View Structure Prediction Details

Protein: CE38084
Organism: Caenorhabditis elegans
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38084.

Description E-value Query
Range
Subject
Range
CE33668 - status:Partially_confirmed UniProt:Q9TXJ8 protein_id:AAK21428.2
442.0 [0..1] [608..24]

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Predicted Domain #1
Region A:
Residues: [1-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVLLSKLS TELADLDGEI GQIDQQISQL RRKKSELTQK RQAIERKIEL KTNEDSDVVT  60
   61 DRWDRDGFPW SDEATKILKE QFHLEKFRPL QRAAINAVMS KEDAVVILST GGGKSLCYQL 120
  121 PALLANGLAL VVSPLISLVE DQILQLRSLG IDSSSLNANT SKEEAKRVED AITNKDSKFR 180
  181 LLYVTPEKLA KSKKMMNKLE KSLSVGFLKL IAIDEVHCCS QWGHDFRTDY SFLNVLKRQF 240
  241 KGVPILGLTA TATSNVLDDV KDMLGIQAAL TFRAGFNRSN LKYKVVQKPG SEDECTEEIA 300
  301 KTIKRDFAGQ TGIIYCLSRN DCEKVAKALK SHGIKAKHYH AYMEPVDRSG AHQGWISGKI 360
  361 QVIVATVAFG MGIDKPNVRF VIHHSLPKSI ENYYQESGRA GRDGQPATCI LYYRLADIFK 420
  421 QSSMVQQERT GIQNLYNMVR YAADSSTCRR VKLAEHFEEA WEPSWCQKQC DTCENGNGFV 480
  481 GTSSKESTDV SEAAKTTVRI IEEHLNSAKD GSGRITGNKL VELLTKKLKG SRNREFCEKL 540
  541 IVNLLLEGYL QEDFHYTVYS VISYVVIGSK WRVYNGKDAI KMRHVEESKS RKRKASSSVE 600
  601 EEDVMVLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.69897
Match: 2v1xA
Description: No description for 2v1xA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle