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Protein Overview: CE39907

General Information:
Name(s) found: CE39907 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00016907 status:Confirmed UniProt:O01826 protein_id:CCD67947.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 554 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed article]
    establishment of nucleus localization [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKRRASNKK PSGLNKSLGN SLSNDREKTR KSHQRAKYDG NDIENPAFME HEVNHYIDSV  60
   61 TDETSLEEFL AKAELAGTEF TAEKEQFKII EKNSAIVVPT RLDYRANLDL QKENEHRLRI 120
  121 PRRPAKELWE NMEDLTKLEN EAFLQWRSDL SELQEVDGLV LTPFERNPDM WRELWRVVEK 180
  181 SDIIVQIVDA RNPLLFRSKD LDDYVKEVDP AKQILLLVNK ADLLKPEQQA SWREYFEKEN 240
  241 IKVIFWSAID EVLDPIDEDA VETSNPSTST HMFVTNKDEL IAKFKELGHV SDEPSAKPVM 300
  301 VGMVGYPNVG KSSTINKLAG GKKVSVSATP GKTRHFQTIH IDSQLCLCDC PGLVMPSFSF 360
  361 GRSEMFLNGI LPVDQMRDHF GPTSLLLSRV PVHVIEATYS IMLPEMQSPS AINLLNSLAF 420
  421 MRGFMASSGI PDCSRAARLM FKDVVSGKLI WAAAPPGVEQ EEFDRISYPD KKTRDIGRVQ 480
  481 MEKLAKLQLL EGDELKGSQF DSQHFVGSIG VAHVRDSKAL PQTLGTVIPT APTENNGKKH 540
  541 YKGKKDKLRR IYNE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] PSI-BLAST 26.221849 Structure of the GTP-binding protein TrmE from Thermotoga maritima
    2 View Details [85..456] PSI-BLAST 69.39794 No description for 2hjgA was found.
    3 View Details [457..554] PSI-BLAST 43.30103 GTPase Era, N-terminal domain; GTPase Era C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • transcription regulator activity
    		•  0.879930725772154 bayes_pls_golite062009
  • binding
    		•  0.876107103608178 bayes_pls_golite062009
  • protein binding
    		•  0.168412545560702 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle