| Protein: | CE39907 |
| Organism: | Caenorhabditis elegans |
| Length: | 554 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39907.
| Description | E-value | Query Range |
Subject Range |
|
|
273.0 | [0..86] | [452..3] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MTKRRASNKK PSGLNKSLGN SLSNDREKTR KSHQRAKYDG NDIENPAFME HEVNHYIDSV 60
61 TDETSLEEFL AKAELAGTEF TAEK
|
| Detection Method: |  |
| Confidence: | 26.221849 |
| Match: | 1xzpA |
| Description: | Structure of the GTP-binding protein TrmE from Thermotoga maritima |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [85-456] |
1 11 21 31 41 51
| | | | | |
1 EQFKIIEKNS AIVVPTRLDY RANLDLQKEN EHRLRIPRRP AKELWENMED LTKLENEAFL 60
61 QWRSDLSELQ EVDGLVLTPF ERNPDMWREL WRVVEKSDII VQIVDARNPL LFRSKDLDDY 120
121 VKEVDPAKQI LLLVNKADLL KPEQQASWRE YFEKENIKVI FWSAIDEVLD PIDEDAVETS 180
181 NPSTSTHMFV TNKDELIAKF KELGHVSDEP SAKPVMVGMV GYPNVGKSST INKLAGGKKV 240
241 SVSATPGKTR HFQTIHIDSQ LCLCDCPGLV MPSFSFGRSE MFLNGILPVD QMRDHFGPTS 300
301 LLLSRVPVHV IEATYSIMLP EMQSPSAINL LNSLAFMRGF MASSGIPDCS RAARLMFKDV 360
361 VSGKLIWAAA PP
|
| Detection Method: | |
| Confidence: | 69.39794 |
| Match: | 2hjgA |
| Description: | No description for 2hjgA was found. |
|
Region A: Residues: [457-554] |
1 11 21 31 41 51
| | | | | |
1 GVEQEEFDRI SYPDKKTRDI GRVQMEKLAK LQLLEGDELK GSQFDSQHFV GSIGVAHVRD 60
61 SKALPQTLGT VIPTAPTENN GKKHYKGKKD KLRRIYNE
|
| Detection Method: | |
| Confidence: | 43.30103 |
| Match: | 1egaA |
| Description: | GTPase Era, N-terminal domain; GTPase Era C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 0.879930725772154 | bayes_pls_golite062009 |
| binding | 0.876107103608178 | bayes_pls_golite062009 |
| protein binding | 0.168412545560702 | bayes_pls_golite062009 |
