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Protein Overview: VP13C_DICDI

General Information:
Name(s) found: VP13C_DICDI [Swiss-Prot]
Description(s) found:
Found 4 descriptions.
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  • Putative vacuolar protein sorting-associated protein 13C OS=Dictyostelium discoideum GN=tipC PE=3 SV=1 [Swiss-Prot]
    • Organism: Dictyostelium discoideum
    Length: 3848 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: late endosome to vacuole transport [ISS]
    culmination involved in sorocarp development [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSHIAASVL TKYLGDYVDD LNKDNIKLSF LSGEAVLQDL KIKKTVLQSF LPNVIVKQAI  60
   61 IKKLSLHVPW KDLKGKPAII KIEGIYVLAE TSVEFDEQYY KKKFQDEKQA KLHIQEVLRL 120
  121 NKQQLKNPHQ STTTTTTTSD ESNTFGSKLL QTVVDNLQLY IDSVHIRFED SVNRRSFSFG 180
  181 VTLNSLVAES TDQTWNPTFI KNESTIIHKL INLNQLSIYW NSNSPKLKYT NIDDLSQKLK 240
  241 SMIKKEDSGK QQQQQQQQQG EEQDDEIEED YFLSTESRKQ QYIIDPISAK LKVVINKSII 300
  301 PSEVIPKYNL NFEFDKTDIS LSDYQYKDIT GILESFKLFE KSIEFRSARP INTTIKQSPR 360
  361 KWWNYAIQCV LQKVHQKRYT QSWSYIKEFL SDKRDYIELF KKLKKKTIHQ TEQTRLDSLE 420
  421 WKLPFDQILF FRNLSFKIIE KEEKLEKERL KLQQQQQQQQ QNLNKISPTT TTTPSTSTGG 480
  481 GGWLSSWWKP IVNTSVPITA ATTTTTATNT DSTITKLKDI KLSKDDWNEI YDTIGYDEND 540
  541 DIINSNVASL QQPKQFGKDF SNIIKTVINF RLVQGGLKLK KKRRTIALLQ LNDISLSLKS 600
  601 KINSSFVFNG NLKGLELIDQ STFNTQFPKL ISPLLKRNSS SIPTKIISQP PIFNITLESH 660
  661 SLSSTITSST TTATTTQSTS TNSNNNNNIK VNYSLSIQSK PLTIVYYPKF ISTVNDFFFK 720
  721 KEDDQDVQDM VLEDLEKKAQ ETIESIKAQT RDKLLLAISN KTTFSIDMDL EAPIILVPES 780
  781 ITNKNTNLLI LDLGKLLINH YPKQQQLQQQ LQQLQQEQGQ EQEQEQKQEQ KQEQEQKDWK 840
  841 EEFYDEYLFK LINTQVLLAN LKNDWRDIEQ VKKFRMNIAN PLNANFTLKI SKLNNRQLLT 900
  901 SLKLMASIDL LEFYLSSCQY VNLVNIIQSV TQPIDQQQQL IGSESMYMSA FDYSSVYQSN 960
  961 IFKQPQQLQP QQKQQSPPLI SSPPLIKKKK SYSKEFIDSY KMFEASFNID KFNIHLRLDN1020
 1021 YDSSGSSSNN DSSNTTTTNH NQLVSHNVAL VYLRCLHGTY VQKLFDTNLE LLIKGMWIED1080
 1081 CFQKPQSIAH GSGGDYLATT TNRFKPNDVN IGGGSNENLI KFKIQQISSD SPFYNNIDKL1140
 1141 LDIELSQINL ILNRKTVAGL IEFSNSVSNL SILKNNQNNN QNNNQNNNQN INESSPTVFI1200
 1201 TSPPPPPPPP LNHQSNNNSQ YDTLSSSTYL IRNSNNKILP PIQQISTTAN NNIKIQTKAT1260
 1261 IKIDLVRILL TRENNNPLIK ASFTGFNCTT DQYNYKTIMN GKLGSLKIYD MTTEGRNYRT1320
 1321 ILTTRERKLN NKTSPTTPSS SGVSTGTTFD IDIDNFDTVS SSSSSSLLSS SSLLISPPGG1380
 1381 EQSSLVYFQF ESRNDNNSQM LKINLSSIRF IFLKRFTEEL RLFLNNVNMM REYLKSSIYS1440
 1441 AATVISQNRS TLFYEIEIQN PYIVIPLSSL SNKIFIVDLG KINIKNQFEK IIPTSTGEID1500
 1501 MILMEPVIIE NIIIEAQNIK LLSGLNSEIK KSENNNNNNN NSNTNQRSYG TMVSDVNVSI1560
 1561 NLKTPLFSEL NLKQYLEQCM KLQSWEKHFT ISQFELNVSE YELKSLIELL DGNLSEFSSE1620
 1621 ILNDANSSFD QQKQQEIEKL KLQQEIEDNN NDNEDEQVNK LLQLIKEQVG YTYCKLGKFS1680
 1681 IMFMKRDGTD IDDRLVLFYV SEAKMDIIKE EMETSMNIEI KSVQMKDFSK ETHPHLRNIL1740
 1741 TPLSLKSVNE KRQQKEQILP QIIIKGSIKP PPIQQSLFQI SIDGMFMIFV PHSWIPVQDS1800
 1801 IMKLSKFATE AWNRYTIKVY GEAPTNDEII QSGLSLFSLS IKDIKISIPG DCTVNSGQGE1860
 1861 NEYSLFIRSS LDIQTTSRGA MGVETITLID ANNIQIYRNQ LVDTNNENIN NNNNNNLTTS1920
 1921 TTTTTTTNKN QSNIKIIAPF KIVFQTTSTL LNSESSLSIN NIVVTFSYQD FKLMMKIINS1980
 1981 IIESNNQNLI QEKMKRNYLK KYRDPNECTS DDELEEQLQQ LENDDYNDDN YNSNGNNNNN2040
 2041 NSNNQLPVKE DSQLQKYLSI SLEKGEFILN DDHKISSPIK LLSIGVDGLK SNIFSFPQKN2100
 2101 QIALSLDANM KAGYFNKNIG IWEPLIENWG FSFTSNNSIE GGWMVNFNSK IPLYINITKI2160
 2161 FIDTSISTYQ IWADDYYSQQ KKDKKNKSND YDNDEIIEDT VEQVNNDLIK PADDQKNNNN2220
 2221 NKNDNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNKNNN DNNNNIKNNN2280
 2281 NNENNNNKNL QEKEEIKYPY YIRNDTGVEL WYWVRSDEIQ KLPVGKEAGF NPKFSSSSSS2340
 2341 SQQQQQQPLS PLLQTQQQIQ LKPEELQQKI ELERKISFQL FGDFQPIAKV PMDSIGTYTL2400
 2401 YPMPEYKNIK LLYEISYRNG AKVLSLHSNF NIRNDTDIPV VVHITAIYNQ IPRSIEILLN2460
 2461 PHVKIPIPVE YTIGRIKYKP YNLGYDYSAE RIDCSNVLQL FKSSKQKQKQ LNNQLQQQSN2520
 2521 NNNNNNNNNN NTNSNNSNLL GNLIGGNNNN NDLNIGKISS KMICKHGVKL PFVFLSSIEK2580
 2581 NSLETKNTIE ISINTAIMIE NVLACDLQYR LYHGKNKKII GSAFFSGVIP MGKKLPVLVY2640
 2641 DSLQDIYMEF QIYDFQWSPL CLIDSMVGLA VTDKVKIEDR LHQPLLISFD NRIQPNGSRF2700
 2701 VTLYCEYWLI NQTGLPLYFR HHIGAQTIDP AGQTPTKQIE TIHESTSMKP TDSRNWYTKE2760
 2761 WNHPSQPFMF AYSDNSIVGG KFSLKIYDSN WSSPFSLISS QSSSNSNIEI SEDRTDEEKE2820
 2821 IKNVIGTITK RQPLKTNYNL SVSILPSNSK FWRTKVVTFS PMYLMVNSTR FRILYQQFDC2880
 2881 DSNTQSIIQD QSLPFQFPSS RHEKLIRIGI LDTSAISNNP YNANDVSNIK WSGYFNPQIL2940
 2941 GQVVLRLRNE TDNSSGGVLN KFKKDSEIST KKRNSNFISN LLTIKNKQLN VDSSNQQQQQ3000
 3001 LQQQQQQQQQ QQQQQQQQQQ QQQQQQQSIN QQTSLNSSSS STITSTNSTV IFEDLRVFIN3060
 3061 VTIRVKSSKS LTTTMIILNE QNPELPPYRI NNKTRFPLWI RQKKTEIWDK VQPKTSIPYA3120
 3121 WDHPILPKKL IIEFPTGLTK TYRLGNLEEN SIVSIKNPNS SGGYDRVDFQ ISIIANGPTR3180
 3181 VLNIKERDLN GDTNNNTISP QLNSIETFGI TNDPNNPNNP NNNPNNNDKL NVKYEFSIDL3240
 3241 SNIGISIINK IPTREEIVYL SIDGLKLEVK QSKLDQYIQF KVDDLQIDDQ RYSTNFPVFL3300
 3301 CQSKKINHSI NQQPNQQSSS PQSTNTTTTT TTNTTTTNNT TQQQKLKPFL QFSATRTLKY3360
 3361 SNIMFFRYFS ILIQEFDINL DEASILNALS FININLNSLN EHFTLHPTIT QEEILETKNA3420
 3421 SNIENHMVYF EMLHINPVKM NLSFISCKSP KETQAILGAR SLAELLIGFK SNSPFLNIER3480
 3481 APIKFNGFIW EHPFLSTRQV IDEISLHFSY QMMSQAHKIF GSFDFIGNPI RLAESLGSGF3540
 3541 KDFFHEPALG LVKSPQDFAA GLSKGTSSLI NNSVFGFADS TSKITGTISK GLVQLSLDDS3600
 3601 YIKERQESNK QKPKGVKEGL EFGFRDFGEG VIKGITGIID EPYKGATQEK SWEGFFKGIG3660
 3661 KGVLGVAVKP TVGVFDLVSK TSEGIKNSTT VAKSLSQIKR RRIPRYFPRE GTLSTYNQFK3720
 3721 SIGSFILYSK IGPPPTHDWY VFHTILNYKD LILIGSNYHL LLIRCANLSI NGNLSDSEII3780
 3781 WKVKFSEIIQ IKNIPSNFGF QLFVNVNGVG QPPITLLIPT LTEEVRNSVV RKITDLILLE3840
 3841 KRFGNNLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle