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Protein Overview: AMD1

General Information:
Name(s) found: AMD1 [HGNC (HUGO)]
Description(s) found:
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  • gi|74275346|ref|NP_001625.2| adenosylmethionine decarboxylase 1 isoform 1 precursor [Homo sapiens] [NCBI NR]
  • gi|56206205|emb|CAI23233.1| adenosylmethionine decarboxylase 1 [Homo sapiens] [NCBI NR]
  • gi|55664717|emb|CAH73388.1| adenosylmethionine decarboxylase 1 [Homo sapiens] [NCBI NR]
  • gi|12652837|gb|AAH00171.1| Adenosylmethionine decarboxylase 1 [Homo sapiens] [NCBI NR]
  • gi|119568694|gb|EAW48309.1| adenosylmethionine decarboxylase 1, isoform CRA_a [Homo sapiens] [NCBI NR]
  • gi|119568692|gb|EAW48307.1| adenosylmethionine decarboxylase 1, isoform CRA_a [Homo sapiens] [NCBI NR]
  • gi|116241324|sp|P17707.2|DCAM_HUMAN RecName: Full=S-adenosylmethionine decarboxylase proenzyme; Short=AdoMetDC; Short=SAMDC; Contains: RecName: Full=S-adenosylmethionine decarboxylase alpha chain; Contains: RecName: Full=S-adenosylmethionine decarboxylase [NCBI NR]
  • adenosylmethionine decarboxylase 1 [HGNC (HUGO)]
  • S-adenosylmethionine decarboxylase proenzyme OS=Homo sapiens GN=AMD1 PE=1 SV=2 [Swiss-Prot]
  • adenosylmethionine decarboxylase 1 [Homo sapiens]gi|12652837|gb|AAH00171.1| S-adenosylmethionine decarboxylase 1, precursor [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 S-adenosylmethionine decarboxylase 1 isoform 1 precursor [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • S-adenosylmethionine decarboxylase 1 isoform 1 precursor [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • Tax_Id=9606 Adenosylmethionine decarboxylase 1 [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • adenosylmethionine decarboxylase 1 [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • adenosylmethionine decarboxylase 1, isoform CRA_a [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Adenosylmethionine decarboxylase 1 [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 S-adenosylmethionine decarboxylase proenzyme [EBI-IPI_human_3.23_11-02-2006_con_reversed.fasta]
  • adenosylmethionine decarboxylase 1 isoform 1 precursor [Homo sapiens] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=AMD1 S-adenosylmethionine decarboxylase proenzyme [human-ipi-250309-contam.fasta]
  • IPI:IPI00016708.2|SWISS-PROT:P17707|TREMBL:Q6N0B2|ENSEMBL:ENSP00000357880|REFSEQ:NP_001625|H-INV:HIT000055151|VEGA:OTTHUMP00000017012 Tax_Id=9606 Gene_Symbol=AMD1 S-adenosylmethionine decarboxylase proenzyme [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=AMD1 S-adenosylmethionine decarboxylase proenzyme ENSG00000123505 IPI00843816 IPI00642077 IPI00647077 IPI00016708 [drosphohumanreversed.fasta]
  • S-adenosylmethionine decarboxylase proenzyme isoform 1 precursor [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • P17707;Q5VXN6;Q9BWK4; RecName: Full=S-adenosylmethionine decarboxylase proenzyme; Contains: RecName: Full=S-adenosylmethionine decarboxylase alpha chain; Contains: RecName: Full=S-adenosylmethionine decarboxylase beta chain; Flags: Precursor; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • S-adenosylmethionine decarboxylase proenzyme OS=Homo sapiens GN=AMD1 [011711_HMR.fasta]
  • GeneSymbol=AMD1 Synonyms=ADOMETDC|AMD|DKFZp313L1234|FLJ26964|SAMDC S-adenosylmethionine decarboxylase proenzyme isoform 1 precursor [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • S-adenosylmethionine decarboxylase proenzyme GN=AMD1 [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 334 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAHFFEGT EKLLEVWFSR QQPDANQGSG DLRTIPRSEW DILLKDVQCS IISVTKTDKQ  60
   61 EAYVLSESSM FVSKRRFILK TCGTTLLLKA LVPLLKLARD YSGFDSIQSF FYSRKNFMKP 120
  121 SHQGYPHRNF QEEIEFLNAI FPNGAAYCMG RMNSDCWYLY TLDFPESRVI SQPDQTLEIL 180
  181 MSELDPAVMD QFYMKDGVTA KDVTRESGIR DLIPGSVIDA TMFNPCGYSM NGMKSDGTYW 240
  241 TIHITPEPEF SYVSFETNLS QTSYDDLIRK VVEVFKPGKF VTTLFVNQSS KCRTVLASPQ 300
  301 KIEGFKRLDC QSAMFNDYNF VFTSFAKKQQ QQQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..334] PSI-BLAST 151.0 S-adenosylmethionine decarboxylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • adenosylmethionine decarboxylase activity
    		•  6.97190143843809 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  2.68228786608236 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.55250570844159 bayes_pls_golite062009
  • binding
    		•  1.4725833406744 bayes_pls_golite062009
  • catalytic activity
    		•  1.25843830926101 bayes_pls_golite062009
  • lyase activity
    		•  0.834955527171148 bayes_pls_golite062009
  • protein binding
    		•  0.443666756110255 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle