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Protein Overview: CCA12_ARATH

General Information:
Name(s) found: CCA12_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|22330698|ref|NP_177863.2| CYCA1;2 (CYCLIN A1;2); cyclin-dependent protein kinase regulator [Arabidopsis thaliana] [NCBI NR]
  • gi|148887347|sp|Q9FVX0.2|CCA12_ARATH RecName: Full=Cyclin-A1-2; AltName: Full=G2/mitotic-specific cyclin-A1-2; Short=CycA1;2; AltName: Full=Protein TARDY ASYNCHRONOUS MEIOSIS [NCBI NR]
  • Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2 [Swiss-Prot]
  • cyclin, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: CYCA1, CYCA1;2 | CYCA1;2 (CYCLIN A1;2); cyclin-dependent protein kinase regulator | chr1:29086798-29089031 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • CYCA1;2; cyclin-dependent protein kinase regulator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 | chr1:29081904-29084137 REVERSE LENGTH=442 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: regulation of meiotic cell cycle [IMP]
    male meiosis [IMP]
    microsporogenesis [IMP]
    meiosis II [IMP]
    pachytene [IMP]
    regulation of cell cycle [ISS]
    Molecular Function: cyclin-dependent protein kinase regulator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSRNLSQ ENPIPRPNLA KTRTSLRDVG NRRAPLGDIT NQKNGSRNPS PSSTLVNCSN  60
   61 KIGQSKKAPK PALSRNWNLG ILDSGLPPKP NAKSNIIVPY EDTELLQSDD SLLCSSPALS 120
  121 LDASPTQSDP SISTHDSLTN HVVDYMVEST TDDGNDDDDD EIVNIDSDLM DPQLCASFAC 180
  181 DIYEHLRVSE VNKRPALDYM ERTQSSINAS MRSILIDWLV EVAEEYRLSP ETLYLAVNYV 240
  241 DRYLTGNAIN KQNLQLLGVT CMMIAAKYEE VCVPQVEDFC YITDNTYLRN ELLEMESSVL 300
  301 NYLKFELTTP TAKCFLRRFL RAAQGRKEVP SLLSECLACY LTELSLLDYA MLRYAPSLVA 360
  361 ASAVFLAQYT LHPSRKPWNA TLEHYTSYRA KHMEACVKNL LQLCNEKLSS DVVAIRKKYS 420
  421 QHKYKFAAKK LCPTSLPQEL FL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] MSA 3.523991 View MSA. No confident structure predictions are available.
    2 View Details [167..442] PSI-BLAST 66.221849 No description for 2jgzB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle