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Protein Overview: VSR7_ARATH

General Information:
Name(s) found: VSR7_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 625 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [ISS]
    Golgi transport complex [IPI]
    trans-Golgi network [ISS]
    membrane [IDA]
    Biological Process: intracellular protein transport [ISS]
    protein targeting to vacuole [ISS][TAS]
    Molecular Function: calcium ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLVNGRASL TFLLAALTII AMVVEARFVV EKESISVLNP EEMRSKHDGS IANFGLPDYG  60
   61 GFLIGSVVYP DSKTDGCSAF GKTFKPKFPR PTILLLDRGG CYFALKAWHA QQAGAAAVLV 120
  121 ADNVDEPLLT MDSPEESKDA DGFIEKLTIP SVLIDKSFGD DLRQGFQKGK NIVIKLDWRE 180
  181 SVPHPDKRVE YELWTNSNDE CGARCDEQMD FVKNFKGHAQ ILEKGGYTAF TPHYITWFCP 240
  241 FQFINSPHCK SQCINHGRYC APDPEDNFRE GYEGKDVVLE NLRQLCVHRV ANESSRPWVW 300
  301 WDYVTDFHSR CSMKEKKYSI DCAESVIKSL NLPIEKIKKC IGDPEADTEN QVLRTEQVSQ 360
  361 IGRGNRGDVT ILPTLVINNA QYRGRLERTA VLKAICAGFN ETSEPAICLN TGLETNECLE 420
  421 NNGGCWQDTK ANITACQDTF RGRLCECPVV KGVQYKGDGY TSCTPYGPAR CTMNNGGCWS 480
  481 DTRNGLTFSA CSDSVSTGCK CPEGFQGDGL TCEDINECKE RSVCQCSGCR CKNSWGGYKC 540
  541 SCSGDRLYIN DQDTCIERYG SKTAWWLTFL ILAIVAVAGL AGYIFYKYRF RSYMDSEIMT 600
  601 IMSQYMPLES QRAREVPSEA EPFTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] deduced N/A No confident structure predictions are available.
    2 View Details [71..187] PSI-BLAST 8.154902 Structure of C5a peptidase- a key virulence factor from Streptococcus
    3 View Details [188..558] PSI-BLAST 21.0 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor
    4 View Details [559..625] PSI-BLAST 11.0 NMR structure of the human NOTCH-1 ligand binding region

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.286076792172079 bayes_pls_golite062009
  • protein binding
    		•  0.14494900666454 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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