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Protein Overview: gi|20268740, gi|...

General Information:
Name(s) found: gi|30689119 [NCBI NR]
gi|26451659 [NCBI NR]
gi|21280899 [NCBI NR]
gi|20268740 [NCBI NR]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • gi|30689119|ref|NP_850375.1| ribosomal protein L1 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26451659|dbj|BAC42926.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21280899|gb|AAM45043.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20268740|gb|AAM14073.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 415 amino acids

    Gene Ontology:
    Cellular Component: large ribosomal subunit [IEA][ISS]
    ribosome [IEA][ISS]
    intracellular [IEA]
    Biological Process: RNA processing [IEA]
    translation [IEA][ISS]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAMKLLLSQ ARRQGLIKPF SSPFQQIPRL FSSSSSSSSS SSSSSDSNPS PDSNESRKKA  60
   61 VTIEPVSYAA KPKDQKSEPK NVESTENLQS PESANWTREE IRYVKDSPSI NPVSYAQRVA 120
  121 PLPEDRVAGE NEGDRTPEEM ERERKRIELE NRARRRFLRA NAVEEDTSSL PLPTLLKPEL 180
  181 KHGKKPIFDL MEAIREIKGN AKAKFDETLE AHVRLGIEKG RSELIVRGTL ALPHSVKKDV 240
  241 KVAFFAEGAD AEDAKAAGAD VVGGLELIEE ILKSGKIDFD RCLATPKMMP RVYKISRILN 300
  301 NHGLMPNPKQ GSVTKDVTKA VKDAKAGHTK FRMDKTSILH VPLGKMSFSE EALRENVGAF 360
  361 MNALLLAKPA GLKKTSKYAG YVNAFHLCST MGKGYPVSIQ SLSRAADLHT KLQLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] MSA 34.065997 View MSA. No confident structure predictions are available.
    2 View Details [151..415] PSI-BLAST 72.69897 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.98821526471491 bayes_pls_golite062009
  • structural molecule activity
    		•  9.4110731269774 bayes_pls_golite062009
  • binding
    		•  1.37133122073906 bayes_pls_golite062009
  • protein binding
    		•  0.335149649581279 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle