| Protein: | gi|20268740, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 415 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20268740, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
294.0 | [0..168] | [403..1] |
|
Region A: Residues: [1-150] |
1 11 21 31 41 51
| | | | | |
1 MAAMKLLLSQ ARRQGLIKPF SSPFQQIPRL FSSSSSSSSS SSSSSDSNPS PDSNESRKKA 60
61 VTIEPVSYAA KPKDQKSEPK NVESTENLQS PESANWTREE IRYVKDSPSI NPVSYAQRVA 120
121 PLPEDRVAGE NEGDRTPEEM ERERKRIELE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [151-415] |
1 11 21 31 41 51
| | | | | |
1 NRARRRFLRA NAVEEDTSSL PLPTLLKPEL KHGKKPIFDL MEAIREIKGN AKAKFDETLE 60
61 AHVRLGIEKG RSELIVRGTL ALPHSVKKDV KVAFFAEGAD AEDAKAAGAD VVGGLELIEE 120
121 ILKSGKIDFD RCLATPKMMP RVYKISRILN NHGLMPNPKQ GSVTKDVTKA VKDAKAGHTK 180
181 FRMDKTSILH VPLGKMSFSE EALRENVGAF MNALLLAKPA GLKKTSKYAG YVNAFHLCST 240
241 MGKGYPVSIQ SLSRAADLHT KLQLK
|
| Detection Method: | |
| Confidence: | 72.69897 |
| Match: | 1eg0N |
| Description: | 70S ribosome functional complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 9.98821526471491 | bayes_pls_golite062009 |
| structural molecule activity | 9.4110731269774 | bayes_pls_golite062009 |
| binding | 1.37133122073906 | bayes_pls_golite062009 |
| protein binding | 0.335149649581279 | bayes_pls_golite062009 |
