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Protein Overview: RSSA1_ARATH

General Information:
Name(s) found: RSSA1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|73920779|sp|Q08682.3|RSSA1_ARATH RecName: Full=40S ribosomal protein Sa-1; AltName: Full=p40; AltName: Full=Laminin receptor homolog [NCBI NR]
  • gi|402904|gb|AAA53425.1| laminin receptor-like protein [NCBI NR]
  • pir||F96747 hypothetical protein T10D10.16 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|23198426|gb|AAN15740.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] [NCBI NR]
  • gi|22530972|gb|AAM96990.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] [NCBI NR]
  • gi|21593556|gb|AAM65523.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] [NCBI NR]
  • gi|21386953|gb|AAM47880.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] [NCBI NR]
  • gi|18958036|gb|AAL79591.1| At1g72370/T10D10_16 [Arabidopsis thaliana] [NCBI NR]
  • gi|17473615|gb|AAL38272.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] [NCBI NR]
  • gi|16604531|gb|AAL24271.1| At1g72370/T10D10_16 [Arabidopsis thaliana] [NCBI NR]
  • gi|15809888|gb|AAL06872.1| At1g72370/T10D10_16 [Arabidopsis thaliana] [NCBI NR]
  • gi|15218458|ref|NP_177381.1| P40; structural constituent of ribosome [Arabidopsis thaliana] [NCBI NR]
  • gi|12325280|gb|AAG52587.1|AC016529_18 putative 40S ribosomal protein SA (laminin receptor-like protein); 68387-70081 [Arabidopsis thaliana] [NCBI NR]
  • (Q08682) 40S ribosomal protein SA-1 (p40) (Laminin receptor homolog) [Swiss-Prot]
  • 40S ribosomal protein Sa-1 OS=Arabidopsis thaliana GN=RPSaA PE=1 SV=3 [Swiss-Prot]
  • putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana]gi|23198426|gb|AAN15740.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana]gi|22530972|gb|AAM96990.1| putative 40S ribosomal [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 40S ribosomal protein SA-1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AP40, RP40, RPSAA, P40 | P40 (40S ribosomal protein SA); structural constituent of ribosome | chr1:27246810-27248504 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g72370/T10D10_16 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • laminin receptor-like protein [nr-271106-contam.fasta]
  • P40; structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative 40S ribosomal protein SA (laminin receptor-like protein); 68387-70081 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 40S ribosomal protein Sa-1 (p40) (Laminin receptor homolog) [nr-271106-contam.fasta]
  • | Symbols: P40, AP40, RP40, RPSAA | 40s ribosomal protein SA | chr1:27243148-27244842 REVERSE LENGTH=298 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 298 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    chloroplast [IDA]
    cytosolic ribosome [IDA]
    cytosolic small ribosomal subunit [IDA][ISS]
    cytoplasm [IDA]
    membrane [IDA]
    small ribosomal subunit [IDA]
    plasma membrane [IDA]
    Biological Process: response to salt stress [IEP]
    response to osmotic stress [IEP]
    mature ribosome assembly [IDA]
    translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNGSASSA QLSQKEADVR MMCAAEVHLG TKNCNYQMER YVFKRRNDGI YIFNLGKTWE  60
   61 KLQMAARVIV AIENPQDIIV QSARPYGQRA VLKFAQYTGA NAIAGRHTPG TFTNQMQTSF 120
  121 SEPRLLILTD PRTDHQPIKE GALGNIPIIA FCDTDSPMRF VDIGIPANNK GKHSIGCLFW 180
  181 LLARMVLQMR GTIAAGQKWD VMVDLFFYRE PEETKPEDED EAGPQAEYGA LPAPEYGMVG 240
  241 GDQWTTAQIP DAAWPGEGQA PISAAPAAAS WSDSAAAPAD GGWEAAAPPS GAPAAGWE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] PSI-BLAST 60.0 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.
    2 View Details [193..298] MSA 3.178983 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle