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Protein Overview: gi|322596, gi|11...

General Information:
Name(s) found: gi|6714479 [NCBI NR]
gi|322596 [NCBI NR]
gi|186509642 [NCBI NR]
gi|18395701 [NCBI NR]
gi|1742969 [NCBI NR]
gi|166600 [NCBI NR]
gi|111609954 [NCBI NR]
Description(s) found:
Found 19 descriptions.
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  • gi|6714479|gb|AAF26165.1|AC008261_22 putative SNF1-related protein kinase [Arabidopsis thaliana] [NCBI NR]
  • pir||JC1446 serine/threonine-specific protein kinase (EC 2.7.1.-) AK21 - Arabidopsis thaliana [NCBI NR]
  • gi|186509642|ref|NP_001118546.1| AKIN10 (Arabidopsis SNF1 kinase homolog 10); protein binding / protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|18395701|ref|NP_566130.1| AKIN10 (Arabidopsis SNF1 kinase homolog 10); protein binding / protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|1742969|emb|CAA64384.1| ser/thr protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|166600|gb|AAA32736.1| SNF1-related protein kinase [NCBI NR]
  • gi|111609954|gb|ABH11527.1| SNR2 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 512 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGSGTGSRS GVESILPNYK LGRTLGIGSF GRVKIAEHAL TGHKVAIKIL NRRKIKNMEM  60
   61 EEKVRREIKI LRLFMHPHII RLYEVIETPT DIYLVMEYVN SGELFDYIVE KGRLQEDEAR 120
  121 NFFQQIISGV EYCHRNMVVH RDLKPENLLL DSKCNVKIAD FGLSNIMRDG HFLKTSCGSP 180
  181 NYAAPEVISG KLYAGPEVDV WSCGVILYAL LCGTLPFDDE NIPNLFKKIK GGIYTLPSHL 240
  241 SPGARDLIPR MLVVDPMKRV TIPEIRQHPW FQAHLPRYLA VPPPDTVQQA KKIDEEILQE 300
  301 VINMGFDRNH LIESLRNRTQ NDGTVTYYLI LDNRFRASSG YLGAEFQETM EGTPRMHPAE 360
  361 SVASPVSHRL PGLMEYQGVG LRSQYPVERK WALGLQSRAH PREIMTEVLK ALQDLNVCWK 420
  421 KIGHYNMKCR WVPNSSADGM LSNSMHDNNY FGDESSIIEN EAAVKSPNVV KFEIQLYKTR 480
  481 DDKYLLDLQR VQGPQFLFLD LCAAFLAQLR VL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..292] PSI-BLAST 77.69897 No description for 2fh9A was found.
    2 View Details [293..340] FFAS03 1.14 Solution structure of RSGI RUH-031, a UBA domain from human cDNA
    3 View Details [341..512] PSI-BLAST 15.39794 No description for 2qlvA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  2.36949910682766 bayes_pls_golite062009
  • binding
    		•  2.36429435103114 bayes_pls_golite062009
  • protein binding
    		•  2.06619290708535 bayes_pls_golite062009
  • DNA binding
    		•  2.0124319122573 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.91576114591492 bayes_pls_golite062009
  • enzyme binding
    		•  0.973545763884891 bayes_pls_golite062009
  • hydrolase activity
    		•  0.835394858232114 bayes_pls_golite062009
  • small conjugating protein binding
    		•  0.678408535705177 bayes_pls_golite062009
  • ubiquitin binding
    		•  0.319972124839967 bayes_pls_golite062009
  • catalytic activity
    		•  0.2736776367506 bayes_pls_golite062009
  • damaged DNA binding
    		•  0.0421213942095382 bayes_pls_golite062009
  • transcription factor binding
    		•  0.00604949932390486 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle