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Protein Overview: FLIC_ECOLI

General Information:
Name(s) found: FLIC_ECOLI [Swiss-Prot]
Description(s) found:
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  • pir||FLEC flagellin - Escherichia coli (strain K-12) [NCBI NR]
  • gi|6009847|dbj|BAA85088.1| flagellin [Escherichia coli] [NCBI NR]
  • gi|30059922|gb|AAP13333.1| FliC [Escherichia coli] [NCBI NR]
  • gi|1736591|dbj|BAA15751.1| flagellar filament structural protein [Escherichia coli W3110] [NCBI NR]
  • gi|146312|gb|AAA23950.1| flagellin [NCBI NR]
  • gi|120312|sp|P04949.2|FLIC_ECOLI RecName: Full=Flagellin [NCBI NR]
  • Flagellin - Escherichia coli [Swiss-Prot]
  • flagellar biosynthesis; flagellin, filament structural protein [Escherichia coli K12]gi|30059922|gb|AAP13333.1| FliC [Escherichia coli]gi|1788232|gb|AAC74990.1| flagellar biosynthesis; flagellin, filament structural protein [Escherichia coli K12]gi|727 [nrdb_11152004_Chlamydomonas]
  • Flagellin [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • flagellin [Escherichia coli] [nr-271106-contam.fasta]
  • FliC [Escherichia coli] [nr-271106-contam.fasta]
  • flagellin [nr-271106-contam.fasta]
  • Flagellin OS=Escherichia coli (strain K12) GN=fliC PE=1 SV=2 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 498 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [UNKNOWNLink to PubMed articleLink to PubMed article][TAS]
    Biological Process: Toll signaling pathway [TAS]
    innate immune response [TAS]
    I-kappaB kinase/NF-kappaB cascade [UNKNOWNLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQVINTNSL SLITQNNINK NQSALSSSIE RLSSGLRINS AKDDAAGQAI ANRFTSNIKG  60
   61 LTQAARNAND GISVAQTTEG ALSEINNNLQ RVRELTVQAT TGTNSESDLS SIQDEIKSRL 120
  121 DEIDRVSGQT QFNGVNVLAK NGSMKIQVGA NDNQTITIDL KQIDAKTLGL DGFSVKNNDT 180
  181 VTTSAPVTAF GATTTNNIKL TGITLSTEAA TDTGGTNPAS IEGVYTDNGN DYYAKITGGD 240
  241 NDGKYYAVTV ANDGTVTMAT GATANATVTD ANTTKATTIT SGGTPVQIDN TAGSATANLG 300
  301 AVSLVKLQDS KGNDTDTYAL KDTNGNLYAA DVNETTGAVS VKTITYTDSS GAASSPTAVK 360
  361 LGGDDGKTEV VDIDGKTYDS ADLNGGNLQT GLTAGGEALT AVANGKTTDP LKALDDAIAS 420
  421 VDKFRSSLGA VQNRLDSAVT NLNNTTTNLS EAQSRIQDAD YATEVSNMSK AQIIQQAGNS 480
  481 VLAKANQVPQ QVLSLLQG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..498] PSI-BLAST 65.69897 R-type straight flagellar filament made of full-length flagellin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.34380033385124 bayes_pls_golite062009
  • protein binding
    		•  0.642381668726993 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle