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Protein Overview: gi|42568893, gi|...

General Information:
Name(s) found: gi|50058841 [NCBI NR]
gi|42568893 [NCBI NR]
gi|28204784 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|50058841|gb|AAT69165.1| hypothetical protein At2g03050 [Arabidopsis thaliana] [NCBI NR]
  • gi|42568893|ref|NP_178405.2| mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] [NCBI NR]
  • gi|28204784|gb|AAO37134.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: embryonic development ending in seed dormancy [IMP]
    cellular response to singlet oxygen [IGI]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIARCSLFPP PCFSAVRIRC FAGETSDTGI LFREKLIYLQ DLNVDPHKAL RVNPSLRSAP  60
   61 ISSVVSVETL LSSTGLSRPA VGRILDMFPD LLTSDPESEI LPVLRFLSNE ISISEQDIPK 120
  121 SISRCPRLLI SSVDYQLRPA LTFLKTLGFV GRDTITSRNT VLLVSNVERT LIPKIEYLEE 180
  181 GLGFTREEVA KMVVRSPALL TYSVDNNLVP KVEFFIEEMR GDVKELKRFP QYFSFSLERK 240
  241 IKPRHRLLKE HGILMPLSEM LKVSDGQFNH WLLELRLRSA ERR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] MSA 1.055986 View MSA. No confident structure predictions are available.
    2 View Details [135..283] MSA 3.057986 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle