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Protein Overview: feh-1

General Information:
Name(s) found: feh-1 / CE38648 [WormBase]
Description(s) found:
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  • WBGene00001410 locus:feh-1 status:Confirmed UniProt:H2L0Q8 protein_id:CCD73821.1 [WormBase]
  • gi|71994864|ref|NP_001022907.1| mammalian FE65 Homolog family member (feh-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|66275470|gb|AAN84832.2| Mammalian fe65 homolog protein 1, isoform c, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_497578.2| mammalian FE65 Homolog, integrase-like protein (63.1 kD) (feh-1) [Caenorhabditis elegans] [NCBI NR]
  • CE38648 WBGene00001410 locus:feh-1 status:Confirmed TR:Q8IA96 protein_id:AAN84832.2 [wormpep150.fasta]
  • mammalian FE65 Homolog, integrase-like protein (63.1 kD) (feh-1) [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • 38648 WBGene00001410 locus:feh-1 status:Confirmed TR:Q8IA96 protein_id:AAN84832.2 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE38648 WBGene00001410 locus:feh-1 status:Confirmed UniProt:Q8IA96_CAEEL protein_id:AAN84832.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE38648 WBGene00001410 locus:feh-1 status:Confirmed UniProt:Q8IA96_CAEEL protein_id:AAN84832.2| [wormORF-contam.fasta]
  • Mammalian fe65 homolog protein 1, isoform c [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • mammalian FE65 Homolog family member (feh-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE38648 WBGene00001410 locus:feh-1 status:Confirmed UniProt:Q8IA96 protein_id:AAN84832.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE38648 WBGene00001410 locus:feh-1 status:Confirmed UniProt:H2L0Q8 protein_id:CCD73821.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of Q9BKZ9, Isoform c of Protein Fe65 homolog OS=Caenorhabditis elegans GN=feh-1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 554 amino acids

    Gene Ontology:
    Cellular Component: actin filament [IDALink to PubMed article]
    ribosome [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: embryonic development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    feeding behavior [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    translation [IEALink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    RNA binding [IEALink to PubMed article]
    structural constituent of ribosome [IEALink to PubMed article]
    beta-amyloid binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVDYSSQDF RQSLAAIDQA SRDGAISRGE DGVRVRQIGD TTIMTEHRDP YSFYWQLDQA  60
   61 RREAESPPRR PPPTDYVIDE EEEVLETVYS PEADDVMFEN QYRRPVRHPL PPPPPIMEEE 120
  121 PKDLPPGWEK HEDPQGYSYY WHVDSGTIQR QPPPPVNRET QADAPPPQII QLPPQQPVIE 180
  181 EHAFKQTTTK RRIEQDEMSE REIEDVAMIE NGDTYHKPVR FAVRSLGWTD ISEDELTAEK 240
  241 SSRAVNRAIV DLTTRSDIDS IPKWGDGREL IMELDDNELA LLDPDSMNVI HSERIQAIRV 300
  301 WGVGRDNGRD FAYVSRDRGT RRFMCHVFRC DTSAKTIANT LRDICKRLML HRRPSSLHAI 360
  361 ESGEKRIVRS EGLTAPIDEP RKVIRCHFLG VTQVPKATGI EILNEAVDRL VSQVRSERWI 420
  421 LADVSIAPST IAIVEVNGQQ IAECRVRYLS FLGIGRDVKH CAFIMQTSSE SFMCYVFHVE 480
  481 PNAAAMAKMV EAACKLRYQK VLDAHSSSRH HSGMSIHGQH PPSTYHGKGW TETFRDAFGS 540
  541 VTSRMVPSRS AQRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] deduced N/A No confident structure predictions are available.
    2 View Details [112..215] PSI-BLAST 14.69897 NMR structure of WW domains (WW3-4) from Suppressor of Deltex
    3 View Details [216..371] FFAS03 3.38 Crystal structure of the phosphotyrosine binding domain(PTB) of mouse Disabled 2(Dab2):implications for Reeling signaling
    4 View Details [372..554] PSI-BLAST 35.30103 Solution Structure of the C-terminal Phosphotyrosine Interaction Domain of APBB2 from Mouse

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.839261228716609 bayes_pls_golite062009
  • protein binding
    		•  0.356989281623449 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  1.37952825516509 bayes_pls_golite062009
  • protein binding
    		•  0.845590096724432 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.0992846891421419 bayes_pls_golite062009
    4
    Term Confidence Notes
  • binding
    		•  1.50787782811555 bayes_pls_golite062009
  • protein binding
    		•  1.00964194060904 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.22504145765203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle