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Protein Overview: gi|13094969

General Information:
Name(s) found: gi|13094969 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|13094969|gb|AAK12103.1|AF323928_1 GcpE [Plasmodium falciparum] [NCBI NR]
    • Organism: Plasmodium falciparum
    Length: 824 amino acids

    Gene Ontology:
    Cellular Component: apicoplast [IDALink to PubMed article]
    Biological Process: isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway [NAS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYIKRLILF MLLFYSHVKI KKLFIKISNV NIFFAEAKKN GKKEFFLFLL NIKKNSQQKK  60
   61 TYHITKRNTI NKSDFLYSLL NEEGNSSKKE YKNLKDEEKY NIIQNIKKYC ECTKKYKRLP 120
  121 TREVVIGNVK IGGNNKIAIQ TMASCDTRNV EECVYQIRKC KDLGADIVRL TVQGVQEAQA 180
  181 SYHIKEKLLS ENVNIPLVAD IHFNPKIALM AADVFEKIRV NPGNYVDGRK KWIDKVYKTK 240
  241 EEFDEGKLFI KEKFVPLIEK CKRLNRAIRI GTNHGSLSSR VLSYYGDTPL GMVESAFEFS 300
  301 DLCIENNFYN LVFSMKASNA YVMIQSYRLL VSKQYERNMM FPIHLGVTEA GFGDNGRIKS 360
  361 YLGIGSLLYD GIGDTIRISL TEDPWEELTP CKKLVENLKK RIFYNENFKE DNELKNNEMD 420
  421 TKNLLNFEEN YRNFNNIKKR NVEKNNNVLH EECTIGNVVT IKELEDSLQI FKDLNLEVDS 480
  481 NGNLKKGAKT TDMVIINDFH NITNLGKKTV DKLMQVGINI VVQYEPHNIE FIEKMEPNND 540
  541 NNNNNNNNNI LFYVDIKNIM NSSEKNIKLS NSKGYGLILN GKEDIQTIKK IKELNRRPLF 600
  601 ILLKSDNIYE HVLITRRINE LLQSLNINIP YIHYVDINSN NYDDILVNST LYAGSCLMDL 660
  661 MGDGLIVNVT NDVLTNKKKI ETKYDEKEEV EEEGNNKDIH RLLSRVALNS FLTLNILQDT 720
  721 RIRLFKTDYI ACPSCGRTLF NIQETTKKIM KLTGHLKGVK IAVMGCIVNG IGEMADAHFG 780
  781 YVGSAPKKID LYYGKELVER NIPEEEACDK LIELIKKHNK WKDP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] deduced N/A No confident structure predictions are available.
    2 View Details [116..824] FFAS03 1.25 Structure of spinach nitrite reductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.3760095884125 bayes_pls_golite062009
  • catalytic activity
    		•  1.30141348136874 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.26901652064943 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.842673723597778 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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