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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13094969
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYIKRLILF MLLFYSHVKI KKLFIKISNV NIFFAEAKKN GKKEFFLFLL NIKKNSQQKK  60
   61 TYHITKRNTI NKSDFLYSLL NEEGNSSKKE YKNLKDEEKY NIIQNIKKYC ECTKKYKRLP 120
  121 TREVVIGNVK IGGNNKIAIQ TMASCDTRNV EECVYQIRKC KDLGADIVRL TVQGVQEAQA 180
  181 SYHIKEKLLS ENVNIPLVAD IHFNPKIALM AADVFEKIRV NPGNYVDGRK KWIDKVYKTK 240
  241 EEFDEGKLFI KEKFVPLIEK CKRLNRAIRI GTNHGSLSSR VLSYYGDTPL GMVESAFEFS 300
  301 DLCIENNFYN LVFSMKASNA YVMIQSYRLL VSKQYERNMM FPIHLGVTEA GFGDNGRIKS 360
  361 YLGIGSLLYD GIGDTIRISL TEDPWEELTP CKKLVENLKK RIFYNENFKE DNELKNNEMD 420
  421 TKNLLNFEEN YRNFNNIKKR NVEKNNNVLH EECTIGNVVT IKELEDSLQI FKDLNLEVDS 480
  481 NGNLKKGAKT TDMVIINDFH NITNLGKKTV DKLMQVGINI VVQYEPHNIE FIEKMEPNND 540
  541 NNNNNNNNNI LFYVDIKNIM NSSEKNIKLS NSKGYGLILN GKEDIQTIKK IKELNRRPLF 600
  601 ILLKSDNIYE HVLITRRINE LLQSLNINIP YIHYVDINSN NYDDILVNST LYAGSCLMDL 660
  661 MGDGLIVNVT NDVLTNKKKI ETKYDEKEEV EEEGNNKDIH RLLSRVALNS FLTLNILQDT 720
  721 RIRLFKTDYI ACPSCGRTLF NIQETTKKIM KLTGHLKGVK IAVMGCIVNG IGEMADAHFG 780
  781 YVGSAPKKID LYYGKELVER NIPEEEACDK LIELIKKHNK WKDP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle