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Protein Overview: gi|7494402

General Information:
Name(s) found: gi|7494402 [NCBI NR]
Description(s) found:
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  • pir||D71603 replication factor C, 140 kDa subunit (ATPase) PFB0895c - malaria parasite (Plasmodium falciparum) [NCBI NR]
  • replication factor C subunit 1, putative [Plasmodium falciparum 3D7]gi|3845304|gb|AAC71968.1| replication factor C subunit 1, putative [Plasmodium falciparum 3D7]gi|7494402|pir||D71603 replication factor C, 140 kDa subunit (ATPase) PFB0895c - malaria pa [nrdb_11152004_Chlamydomonas]
    • Organism: Plasmodium falciparum
    Length: 904 amino acids

    Gene Ontology:
    Cellular Component: DNA replication factor C complex [ISSLink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKDKNLFS DDESDDGRKK KRLKKVSSSL FHDDDDDNFI SNKKVEKSKS KKKSDAIYID  60
   61 DNESNNNNNY NNTNKSSNRK SLENKSSKTS PKFYDITSFF KPSSKKLEDN NTMKKSNSKE 120
  121 DEKLVVNNLN DYFNILQNDN KVTKEDTKSN NVSPKNEINK SNVKRERESE QYEISSENDT 180
  181 VSSKKNVLIS PAKKQKTQNN NNEDLQKFDY LPFHNQKFVI TGVFKNFTRD ELQSKIKEHG 240
  241 GSVMTAVSTK TNYLVHGEYL EDGRLFNEGR KYTKAFELQQ QNKSNIKILN EEELLKLLPQ 300
  301 TDQTQENDKT YASDTIKTEN KDKNYNYEKK DKNYNYEKKD THNTQNEILN QLWVEKYRPK 360
  361 NLNELVGNNQ NVIKLQNWLA SWEDVCIKGI KKPAQKTFRG IFENVNARCA LLSGPAGIGK 420
  421 TTTAKIVSEA SGYNVIEFNA SDERNKAAVE KISEMATGGY SIMSLNNRKL TKTCIIMDEV 480
  481 DGMSSGDKGG STAILKLIEK TKCPIICICN DRQNNKMRTL ANKCYDLKFS MPQKNSVVKR 540
  541 LLEICKKEGI MMEPNALELL WESTCGDIRQ MLNTLQLLSK TYTRIQFLDL KKELNNSNKN 600
  601 IQSLANPFEI TLKLLNFNES SKLNIREIMD LFFVDYELIP YFISENYTNV FNETDKSSAS 660
  661 LNKWNVFSQI AHDLSLADKI KYNMKSNMDF ALLPHFAILS CVCPVMRIKI LKSFMSGRVN 720
  721 FPTAFGKIST FNKNKRLLNE LCFNLSYKLN VCPKYMVTSG FLNYIYFKIM TPLHKADVNQ 780
  781 AIQIMEEYSI TREMVTENLP CLRLPNQENL YDKLDTKLKS SFTRLYNSSH VIKIDPNSMK 840
  841 KGLKSSEKKT TFKLNEFESD EDIDELSESK EDKDDDVLIK TKIDRKGTLK TKPSTKVKSM 900
  901 KKAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..656] PSI-BLAST 79.0 VCP/p97
    2 View Details [657..752] PSI-BLAST 45.045757 Crystal Structure of the Eukaryotic Clamp Loader (Replication Factor C, RFC) Bound to the DNA Sliding Clamp (Proliferating Cell Nuclear Antigen, PCNA)
    3 View Details [753..904] FFAS03 3.14 Crystal Structure of the Eukaryotic Clamp Loader (Replication Factor C, RFC) Bound to the DNA Sliding Clamp (Proliferating Cell Nuclear Antigen, PCNA)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle