YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|115435896, gi...

General Information:
Name(s) found: gi|6815089 [NCBI NR]
gi|34903200 [NCBI NR]
gi|125569867 [NCBI NR]
gi|115435896 [NCBI NR]
gi|113532237 [NCBI NR]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • gi|6815089|dbj|BAA90375.1| putative multifunctional amino acid-tRNA ligase [Oryza sativa Japonica Group] [NCBI NR]
  • gi|34903200|ref|NP_912947.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|125569867|gb|EAZ11382.1| hypothetical protein OsJ_01247 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115435896|ref|NP_001042706.1| Os01g0271200 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113532237|dbj|BAF04620.1| Os01g0271200 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 715 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPKLAFPQD SPPLAILCAA KVAGVSLTLD PKLASGSAPT LHLGSGDFIH GVNTILRYIA  60
   61 RVASVTSFYG QDAIQAAYVD QWLDYAPVIL SGSEFEAACS FLDGYLASRT FLVSYGLSIA 120
  121 DIVVWSNLAG TGQRWESLRR SKKYQNLVRW FNSIADYSDT LDEVVSAYVG KRGIGKSPAP 180
  181 SLKEKLPDSK QNISIPEVDL PGAKVGEVCV RFAPEPSGYL HIGHAKAGLL NKYFAERYKG 240
  241 RLIVRFDDTN PSKESNEFVE NVLKDVETLG IKYDIVTYTS DYFPQLMEMA ENLIKQGKAY 300
  301 VDDTPKEQMR SERMDGVESK CRNNTVQDNL SLWKEMINGT ERGMQCCVRG KLDMQDPNKS 360
  361 LRDPVYYRCN TDPHHRIGSK YKVYPTYDFA CPFVDALEGV THALRSSEYH DRNAQYYRIL 420
  421 QEMGLRRVEI YEFSRLNMVY TVLSKRKLLW FVQNKKVEDW TDPRFPTVQG IVRRGLKVEA 480
  481 LVQFILEQGA SKNLNLMEWD KLWTINKKII DPVCGRHTAV LKDQRVLFTL TNGPEEPFIR 540
  541 VLPRHKKYEG AGKKATTFTN KIWLESADAS VISIGEEVTL MDWGNAIIKE IKTQNGIITE 600
  601 LLGELHLEGS VKMTKLKLTW LPDIEDLVSL SLVEFDYLIK KKKLEEDDNF LDNLNPCTCQ 660
  661 EFPALGDANM RNLKQGEIIQ LERKGYYRCD APFIRSSKPI VLFAIPDGRQ KSATK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..182] PSI-BLAST 19.0 Human glutathione-S-transferase T1-1, apo form
    2 View Details [183..715] PSI-BLAST 161.0 Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain; Glutaminyl-tRNA synthetase (GlnRS)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  7.16276509815667 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  7.16276509815667 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  7.13957775963187 bayes_pls_golite062009
  • ligase activity
    		•  6.11211476973434 bayes_pls_golite062009
  • glutamate-tRNA ligase activity
    		•  5.13420185144914 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  4.61484562096458 bayes_pls_golite062009
  • glutamine-tRNA ligase activity
    		•  4.45248364270113 bayes_pls_golite062009
  • structural molecule activity
    		•  4.261982318682 bayes_pls_golite062009
  • methionine-tRNA ligase activity
    		•  2.56893064485672 bayes_pls_golite062009
  • catalytic activity
    		•  2.37674226834122 bayes_pls_golite062009
  • 5S rRNA binding
    		•  2.25646775578129 bayes_pls_golite062009
  • rRNA binding
    		•  2.12571610259264 bayes_pls_golite062009
  • tyrosine-tRNA ligase activity
    		•  1.88984817882585 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.64840822019417 bayes_pls_golite062009
  • arginine-tRNA ligase activity
    		•  1.50161401062914 bayes_pls_golite062009
  • tryptophan-tRNA ligase activity
    		•  1.14187887833901 bayes_pls_golite062009
  • binding
    		•  1.11291710031577 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.06535308346284 bayes_pls_golite062009
  • cysteine-tRNA ligase activity
    		•  0.844943947059557 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.625793556381714 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle