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Protein Overview: gi|25339783

General Information:
Name(s) found: gi|25339783 [NCBI NR]
Description(s) found:
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  • pir||AF0372 glycine cleavage system transcription repressor gcvR [imported] - Yersinia pestis (strain CO92) [NCBI NR]
  • glycine cleavage system transcriptional repressor [Yersinia pestis CO92]gi|15981016|emb|CAC92305.1| glycine cleavage system transcriptional repressor [Yersinia pestis CO92]gi|25339783|pir||AF0372 glycine cleavage system transcription repressor gcvR [imp [nrdb_11152004_Chlamydomonas]
    • Organism: Yersinia pestis
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQLDEHYLV ITALGADRPG IVNTITRHVS SCGCNIEDSR LAMFGEEFTF IMLLSGSWNA  60
   61 VTLLESTLPQ KGAELDLLIV MKRTNAQGQK AMPTTVWVKV EVNDSPHIIE RFTNLFHCHN 120
  121 MNIAELVSKT QPADGETPPL LHIQMSAHSP ASQNSSIIEH DFYQLCTELN AQGSISVVSY 180
  181 PQHDDRMES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] PSI-BLAST 28.045757 Crystal structure of putative glycine cleavage system transcriptional repressor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • acetolactate synthase activity
    		•  1.8426895540113 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.42429440534204 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  0.932189330120355 bayes_pls_golite062009
  • binding
    		•  0.824916443468813 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.802049795170512 bayes_pls_golite062009
  • catalytic activity
    		•  0.645256181736122 bayes_pls_golite062009
  • DNA binding
    		•  0.580950464710662 bayes_pls_golite062009
  • protein binding
    		•  0.0634623326053931 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle