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Protein Overview: gi|29140437, gi|...

General Information:
Name(s) found: gi|29144798 [NCBI NR]
gi|29140437 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|29144798|ref|NP_808140.1| isoaspartyl dipeptidase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] [NCBI NR]
  • gi|29140437|gb|AAO72000.1| probable isoaspartyl dipeptidase [Salmonella enterica subsp. enterica serovar Typhi Ty2] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. Ty2
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDLSAAEFT LLQGAHLFAP EDRGICDVLL ANGKIIAVGA DIPGDIVPDC AVINLSGRML  60
   61 CPGFIDQHVH LIGGGGEAGP TTRTPEVSLS RLTEAGITTV VGLLGTDSVS RHPASLLAKT 120
  121 RALNEEGITA WMLTGAYHVP SPTITGSVEK DVALIDRVIG VKCAVSDHRS AAPGGNQLTS 180
  181 MAAESRVGGL LGGKPGVSVF HMGSSKKGLQ PLYDILENSD VPIGKLLPTH VNRSESLFEQ 240
  241 ALAFALKGGV IDITTSIPDP VAPAEGIARA VKAGVPLSRV TLSSDGNGSQ PLFDAAGNLT 300
  301 GIGVAGFESL LETLQTLVNH YGFSLTDALR PLTTSVAAFL SLDGKGEIRP GNDADLLVFS 360
  361 ADLRIEQVYA RGKRMVNEGK ACVKGTFEPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..390] PSI-BLAST 50.522879 Isoaspartyl dipeptidase; Isoaspartyl dipeptidase, catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  3.06979421893431 bayes_pls_golite062009
  • catalytic activity
    		•  1.70199291046899 bayes_pls_golite062009
  • peptidase activity
    		•  0.483675247391628 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.0644988334012029 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle