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Protein Overview: gi|16760227

General Information:
Name(s) found: gi|16760227 [NCBI NR]
Description(s) found:
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  • gi|16760227|ref|NP_455844.1| fumarate and nitrate reduction regulatory protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] [NCBI NR]
  • fumarate and nitrate reduction regulatory protein [Salmonella enterica subsp. enterica serovar Typhi Ty2]gi|16760227|ref|NP_455844.1| fumarate and nitrate reduction regulatory protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18]gi|29137 [nrdb_11152004_Chlamydomonas]
  • fumarate and nitrate reduction regulatory protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] [nr-271106-contam.fasta]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18
    Length: 264 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLTNINYG LSRPMIPEKR IIRRIQSGGC AIHCQDCSIS QLCIPFTLNE HELDQLDNII  60
   61 ERKKPIQKGQ TLFKAGDELK SLYAIRSGTI KSYTITEQGD EQITGFHLAG DLVGFDAIGS 120
  121 GHHPSFAQAL ETSMVCKIPF ETLDDLSGKM PNLRQQMMRL MSGEIKGDQD MILLLSKKNA 180
  181 EERLAAFIYN LSRRFAQRGF SPREFRLTMT RGDIGNYLGL TVETISRLLG RFQKSGMLAV 240
  241 KGKYITIENS DALAALAGHT RNVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..264] PSI-BLAST 37.39794 Catabolite gene activator protein (CAP), C-terminal domain; Catabolite gene activator protein, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  1.00625548877971 bayes_pls_golite062009
  • binding
    		•  0.891226539481379 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.87419884003031 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.73981105657966 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.59306579636505 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.53285802828572 bayes_pls_golite062009
  • DNA binding
    		•  0.47798148720399 bayes_pls_golite062009
  • transcription factor activity
    		•  0.159026311884013 bayes_pls_golite062009
  • protein binding
    		•  0.094542444184087 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle