YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|2634890, gi|1...

General Information:
Name(s) found: gi|2634890 [NCBI NR]
gi|16079512 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|2634890|emb|CAB14387.1| glycine decarboxylase (subunit 1) (glycine cleavage system protein P) [Bacillus subtilis subsp. subtilis str. 168] [NCBI NR]
  • gi|16079512|ref|NP_390336.1| glycine dehydrogenase subunit 1 [Bacillus subtilis subsp. subtilis str. 168] [NCBI NR]
  • glycine decarboxylase (subunit 1) (glycine cleavage system protein P) [Bacillus subtilis subsp. subtilis str. 168]gi|2634890|emb|CAB14387.1| glycine decarboxylase (subunit 1) (glycine cleavage system protein P) [Bacillus subtilis subsp. subtilis str. 168 [nrdb_11152004_Chlamydomonas]
  • glycine decarboxylase (subunit 1) (glycine cleavage system protein P) [Bacillus subtilis subsp. subtilis str. 168] [nr-271106-contam.fasta]
  • glycine dehydrogenase subunit 1 [Bacillus subtilis subsp. subtilis str. 168] [nr-271106-contam.fasta]
    • Organism: Bacillus subtilis subsp. subtilis str. 168
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHRYLPATE KDKQEMLATI GVSSIDDLFA DIPENVKYKK EHQIKKAKSE TELTRELTKL  60
   61 ASKNRDTVQY ASFLGAGVYD HYQPVIVDHV ISRSEFYTAY TPYQPEISQG ELQAIFEFQT 120
  121 MICELTGMDI ANSSMYDGGT ALAEAAMLAS GHTKKKKIVV SKTVHPESRE VLKTYAKGQY 180
  181 IDVVEVPAAD GVTDLDALRQ TVCENTAAVI VQYPNFFGRI EPLKDIEPIA HQGKSMFIVS 240
  241 ANPLALGLLT PPGKFQSDIV VGDAHRFGIP SAYGGPHCGF FAVTKKLMRK VPGRLVGQTE 300
  301 DENGKRGFVL TLQAREQHIR RDKATSNICS NQALNALAAS VAMTALGKNG VKDIARQNLL 360
  361 KANYAKQEAK KAGLTVMFDG PMFNEFVIKL DEPVRAVNKR LLAKGMIGGY DLGLTYPELD 420
  421 CHMLIAVTEL RTKEEIDALI QELGDRHE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..448] PSI-BLAST 75.39794 Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in apo form

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.66922865456094 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  2.10290066978837 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  2.10290066978837 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.85532625717753 bayes_pls_golite062009
  • transaminase activity
    		•  1.83482013760414 bayes_pls_golite062009
  • transferase activity
    		•  0.93810038069762 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.71980637947887 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.58373273750311 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.51745245786841 bayes_pls_golite062009
  • O-phospho-L-serine:2-oxoglutarate aminotransferase activity
    		•  0.38671377495281 bayes_pls_golite062009
  • lyase activity
    		•  0.0414385380659299 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle