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Protein Overview: gi|50945195, gi|...

General Information:
Name(s) found: gi|50945195 [NCBI NR]
gi|40253877 [NCBI NR]
gi|40253716 [NCBI NR]
gi|215704704 [NCBI NR]
gi|115476198 [NCBI NR]
gi|113623664 [NCBI NR]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • gi|50945195|ref|XP_482125.1| putative Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (40 kDa thylakoid lumen rotamase) [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|40253877|dbj|BAD05811.1| putative Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (40 kDa thylakoid lumen rotamase) [Oryza sativa Japonica Group] [NCBI NR]
  • gi|40253716|dbj|BAD05657.1| putative Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (40 kDa thylakoid lumen rotamase) [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215704704|dbj|BAG94332.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115476198|ref|NP_001061695.1| Os08g0382400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113623664|dbj|BAF23609.1| Os08g0382400 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 426 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAALAFPTC CCCRRPSLRP SAGRRGRRPV ARCALPSSEN SFSWKEYAIS VALSAGLITG  60
   61 APTLGWPAHA SPLEPVIPDV SVLISGPPIK DPGALLRYAL PIDNKAVREV QKPLEDITDS 120
  121 LKIAGVRALD SVERNVRQAS RALSNGRNLI LGGLAESKRA NGEELLDKLA VGLDELQRIV 180
  181 EDRNRDAVAP KQKELLQYVG TVEEDMVDGF PYEVPEEYSS MPLLKGRATV DMKVKIKDNP 240
  241 NLEDCVFRIV LDGYNAPVTA GNFLDLVERK FYDGMEIQRA DGFVVQTGDP EGPAEGFIDP 300
  301 STGKVRTIPL ELMVDGDKAP VYGETLEELG RYKAQTKLPF NAFGTMAMAR DEFDDNSASS 360
  361 QIFWLLKESE LTPSNANILD GRYAVFGYVT ENEDYLADLK VGDVIESIQV VSGLDNLANP 420
  421 SYKIVG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] deduced N/A No confident structure predictions are available.
    2 View Details [88..209] PSI-BLAST 9.0 Solution Structure of the RNA recognition motif in Peptidyl-prolyl cis-trans isomerase E
    3 View Details [210..426] PSI-BLAST 39.0 Plasmodium yoelii cyclophilin-like protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.218596983141665 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle