| Protein: | gi|50945195, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 426 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50945195, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
377.0 | [0..1] | [426..1] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MAAALAFPTC CCCRRPSLRP SAGRRGRRPV ARCALPSSEN SFSWKEYAIS VALSAGLITG 60
61 APTLGWPAHA SPLEPVIPDV SVLISGP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [88-209] |
1 11 21 31 41 51
| | | | | |
1 PIKDPGALLR YALPIDNKAV REVQKPLEDI TDSLKIAGVR ALDSVERNVR QASRALSNGR 60
61 NLILGGLAES KRANGEELLD KLAVGLDELQ RIVEDRNRDA VAPKQKELLQ YVGTVEEDMV 120
121 DG
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 2cqbA |
| Description: | Solution Structure of the RNA recognition motif in Peptidyl-prolyl cis-trans isomerase E |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [210-426] |
1 11 21 31 41 51
| | | | | |
1 FPYEVPEEYS SMPLLKGRAT VDMKVKIKDN PNLEDCVFRI VLDGYNAPVT AGNFLDLVER 60
61 KFYDGMEIQR ADGFVVQTGD PEGPAEGFID PSTGKVRTIP LELMVDGDKA PVYGETLEEL 120
121 GRYKAQTKLP FNAFGTMAMA RDEFDDNSAS SQIFWLLKES ELTPSNANIL DGRYAVFGYV 180
181 TENEDYLADL KVGDVIESIQ VVSGLDNLAN PSYKIVG
|
| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 2b71A |
| Description: | Plasmodium yoelii cyclophilin-like protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.218596983141665 | bayes_pls_golite062009 |
