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Protein Overview: gi|34499295, gi|...

General Information:
Name(s) found: gi|34499295 [NCBI NR]
gi|34105146 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|34499295|ref|NP_903510.1| formate dehydrogenase [Chromobacterium violaceum ATCC 12472] [NCBI NR]
  • gi|34105146|gb|AAQ61502.1| formate dehydrogenase [Chromobacterium violaceum ATCC 12472] [NCBI NR]
    • Organism: Chromobacterium violaceum ATCC 12472
    Length: 295 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLQSLDIHR RSASPTESPK VRQTLEVAKL IDTSTCIGCK ACQVACSEWN DIREEVGHNI  60
   61 GVYDNPTDLS AKAWTVMRFA EEESNGKLEW LIRKDGCMHC ADPGCLKACP SPGAIVQYSN 120
  121 GIVDFHQENC IGCGYCIAGC PFNIPRISKE DNKAYKCTLC SDRVAVGLEP ACVKTCPTGA 180
  181 IQFGSKEDMK EVAAERVADL KRRGYQHAGL YDPQGVGGTH VMYVLHHADK PEQYSGLPNN 240
  241 PEISPTVQLW KGLLKPLATI GIAAAGLFGF LHYITVGPNR ADDEAESETR EEDKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..295] PSI-BLAST 69.522879 Formate dehydrogenase N, iron-sulfur (beta) subunit; Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • formate dehydrogenase activity
    		•  10.9674358961972 bayes_pls_golite062009
  • 4 iron, 4 sulfur cluster binding
    		•  7.27554333181693 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  6.49651154487804 bayes_pls_golite062009
  • metal cluster binding
    		•  6.49651154487804 bayes_pls_golite062009
  • oxidoreductase activity
    		•  5.98361135786786 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  5.77927347135001 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  5.39747453448396 bayes_pls_golite062009
  • electron carrier activity
    		•  5.05393703018095 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  3.13953145151561 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  2.76338281383262 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  2.70037803782769 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.09041948600744 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.80621486978907 bayes_pls_golite062009
  • catalytic activity
    		•  0.488483980994331 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle