YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34499295, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLQSLDIHR RSASPTESPK VRQTLEVAKL IDTSTCIGCK ACQVACSEWN DIREEVGHNI  60
   61 GVYDNPTDLS AKAWTVMRFA EEESNGKLEW LIRKDGCMHC ADPGCLKACP SPGAIVQYSN 120
  121 GIVDFHQENC IGCGYCIAGC PFNIPRISKE DNKAYKCTLC SDRVAVGLEP ACVKTCPTGA 180
  181 IQFGSKEDMK EVAAERVADL KRRGYQHAGL YDPQGVGGTH VMYVLHHADK PEQYSGLPNN 240
  241 PEISPTVQLW KGLLKPLATI GIAAAGLFGF LHYITVGPNR ADDEAESETR EEDKQ

Type	Start	End	Confidence
Cytoplasmic	1	252	0.52
Transmembrane Helix	253	274	0.70
Non-Cytoplasmic	275	295	0.70