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Protein Overview: gi|34104643, gi|...

General Information:
Name(s) found: gi|34498792 [NCBI NR]
gi|34104643 [NCBI NR]
Description(s) found:
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  • gi|34498792|ref|NP_903007.1| aromatic acid decarboxylase [Chromobacterium violaceum ATCC 12472] [NCBI NR]
  • gi|34104643|gb|AAQ61001.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Chromobacterium violaceum ATCC 12472] [NCBI NR]
  • 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Chromobacterium violaceum ATCC 12472]gi|34498792|ref|NP_903007.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Chromobacterium violaceum ATCC 12472] [nrdb_11152004_Chlamydomonas]
  • 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Chromobacterium violaceum ATCC 12472] [nr-271106-contam.fasta]
    • Organism: Chromobacterium violaceum ATCC 12472
    Length: 201 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRKTITVAL TGASGLPYGL RLIEILLAAG ARVWVLYSQA AQVVAKQEMQ LTLPSRPAEM  60
   61 LAWLRERYPA GDGQLEVYGR EEWFAPAASG SNPPDAMVVC PCSMGTLAAI RHGMSDNLIE 120
  121 RAADVCIKEQ RKLVLVPRET PLSAIHLENM LELARLGVVI LPPSPGFYTH PKSVDDMVDF 180
  181 VVSRILDQLG VAQTLTPRWG E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] PSI-BLAST 54.69897 Crystal Structure of dodecameric FMN-dependent Ubix-like Decarboxylase from Escherichia coli O157:H7

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
    		•  5.88631349530005 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  2.27469953971238 bayes_pls_golite062009
  • catalytic activity
    		•  1.88716391063227 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.67751595868044 bayes_pls_golite062009
  • phosphopantothenoylcysteine decarboxylase activity
    		•  1.6488492075417 bayes_pls_golite062009
  • lyase activity
    		•  0.646446561158526 bayes_pls_golite062009
  • phosphopantothenate--cysteine ligase activity
    		•  0.35505046579356 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle