YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34104643, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRKTITVAL TGASGLPYGL RLIEILLAAG ARVWVLYSQA AQVVAKQEMQ LTLPSRPAEM  60
   61 LAWLRERYPA GDGQLEVYGR EEWFAPAASG SNPPDAMVVC PCSMGTLAAI RHGMSDNLIE 120
  121 RAADVCIKEQ RKLVLVPRET PLSAIHLENM LELARLGVVI LPPSPGFYTH PKSVDDMVDF 180
  181 VVSRILDQLG VAQTLTPRWG E

Type	Start	End	Confidence
Signal Peptide	1	15	0.69
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	201	0.93