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Protein Overview: gi|215694441, gi...

General Information:
Name(s) found: gi|34907856 [NCBI NR]
gi|29367589 [NCBI NR]
gi|222619468 [NCBI NR]
gi|215694441 [NCBI NR]
gi|21104594 [NCBI NR]
gi|115440767 [NCBI NR]
gi|113534194 [NCBI NR]
Description(s) found:
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  • gi|34907856|ref|NP_915275.1| putative arm repeat containing protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|29367589|gb|AAO72656.1| arm repeat protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|222619468|gb|EEE55600.1| hypothetical protein OsJ_03912 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215694441|dbj|BAG89458.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|21104594|dbj|BAB93187.1| putative arm repeat protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115440767|ref|NP_001044663.1| Os01g0823900 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113534194|dbj|BAF06577.1| Os01g0823900 [Oryza sativa Japonica Group] [NCBI NR]
  • putative arm repeat containing protein [Oryza sativa (japonica cultivar-group)]gi|21104594|dbj|BAB93187.1| putative arm repeat containing protein [Oryza sativa (japonica cultivar-group)]gi|29367589|gb|AAO72656.1| arm repeat protein [Oryza sativa (japoni [nrdb_11152004_Chlamydomonas]
  • arm repeat protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Os01g0823900 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative arm repeat protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 680 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGNPAAAAP SSSGSSSVFL PPPSPSDGEL LRPLHRLARD LSAVDTPAPF LRAAFASISR  60
   61 RSKLLAAAFD DLLLCGAAGE LPRSASLCLR EVLLVLQRFK AIVADCSARS RMRLLLESDE 120
  121 MEAELRELNH DLATLLDLLP VVELGLADDV LDVLALASRQ CRRCSPAPES EEALKASVLS 180
  181 LIQEIEREIV PERERLEEIL VEVGINDPAS CSEEIESLEQ EIGDRASEKW TASMIALVGL 240
  241 LRYAKCVLFS ATPRPSDSNS KADVEAEDGE PPVPPSDFRC PISLDLMRDP VVVASGQTYD 300
  301 RESIDRWFSS GKSTCPKTGQ VLANLELVSN KALKNLISKW CRENGVAMEA CEASKSEQAQ 360
  361 AVAANKAALE AARMTASFLV KKLSVSFSPD AANRVVHEIR LLSKSGSENR AFVGEAGAVP 420
  421 LLVPLLYSED AGLQLNAVTA LLNLSILEAN KKRIMHADGA VEAVAHIMSS GATWRAKENA 480
  481 AAAVLSLASV HSYRRRLGRN QSVVEKLVHL VRTGPTSTKK DALAALLTLA GERENVGKLV 540
  541 DAGVAEVALS AISKEETAAA VLAALAKRGG AEAIVNIDGA VARLVAEMRR GTDWARENAT 600
  601 AALVLLCRRL GAPAVTQVMA VPGVEWAIWE LMSIGTERAR RKAASLGRIC RRWAAASAAD 660
  661 GERGGGCPVA TVVPPAMMAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..331] PSI-BLAST 20.30103 Crystal structure of the CHIP U-box E3 ubiquitin ligase
    2 View Details [332..680] PSI-BLAST 39.69897 No description for 2jdqA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.02652482814057 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle