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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|215694441, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGNPAAAAP SSSGSSSVFL PPPSPSDGEL LRPLHRLARD LSAVDTPAPF LRAAFASISR  60
   61 RSKLLAAAFD DLLLCGAAGE LPRSASLCLR EVLLVLQRFK AIVADCSARS RMRLLLESDE 120
  121 MEAELRELNH DLATLLDLLP VVELGLADDV LDVLALASRQ CRRCSPAPES EEALKASVLS 180
  181 LIQEIEREIV PERERLEEIL VEVGINDPAS CSEEIESLEQ EIGDRASEKW TASMIALVGL 240
  241 LRYAKCVLFS ATPRPSDSNS KADVEAEDGE PPVPPSDFRC PISLDLMRDP VVVASGQTYD 300
  301 RESIDRWFSS GKSTCPKTGQ VLANLELVSN KALKNLISKW CRENGVAMEA CEASKSEQAQ 360
  361 AVAANKAALE AARMTASFLV KKLSVSFSPD AANRVVHEIR LLSKSGSENR AFVGEAGAVP 420
  421 LLVPLLYSED AGLQLNAVTA LLNLSILEAN KKRIMHADGA VEAVAHIMSS GATWRAKENA 480
  481 AAAVLSLASV HSYRRRLGRN QSVVEKLVHL VRTGPTSTKK DALAALLTLA GERENVGKLV 540
  541 DAGVAEVALS AISKEETAAA VLAALAKRGG AEAIVNIDGA VARLVAEMRR GTDWARENAT 600
  601 AALVLLCRRL GAPAVTQVMA VPGVEWAIWE LMSIGTERAR RKAASLGRIC RRWAAASAAD 660
  661 GERGGGCPVA TVVPPAMMAS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle