| Protein: | gi|215694441, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 680 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215694441, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
299.0 | [0..32] | [663..10] |
|
Region A: Residues: [1-331] |
1 11 21 31 41 51
| | | | | |
1 MAGNPAAAAP SSSGSSSVFL PPPSPSDGEL LRPLHRLARD LSAVDTPAPF LRAAFASISR 60
61 RSKLLAAAFD DLLLCGAAGE LPRSASLCLR EVLLVLQRFK AIVADCSARS RMRLLLESDE 120
121 MEAELRELNH DLATLLDLLP VVELGLADDV LDVLALASRQ CRRCSPAPES EEALKASVLS 180
181 LIQEIEREIV PERERLEEIL VEVGINDPAS CSEEIESLEQ EIGDRASEKW TASMIALVGL 240
241 LRYAKCVLFS ATPRPSDSNS KADVEAEDGE PPVPPSDFRC PISLDLMRDP VVVASGQTYD 300
301 RESIDRWFSS GKSTCPKTGQ VLANLELVSN K
|
| Detection Method: |  |
| Confidence: | 20.30103 |
| Match: | 2c2lA |
| Description: | Crystal structure of the CHIP U-box E3 ubiquitin ligase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.02652482814057 | bayes_pls_golite062009 |
|
Region A: Residues: [332-680] |
1 11 21 31 41 51
| | | | | |
1 ALKNLISKWC RENGVAMEAC EASKSEQAQA VAANKAALEA ARMTASFLVK KLSVSFSPDA 60
61 ANRVVHEIRL LSKSGSENRA FVGEAGAVPL LVPLLYSEDA GLQLNAVTAL LNLSILEANK 120
121 KRIMHADGAV EAVAHIMSSG ATWRAKENAA AAVLSLASVH SYRRRLGRNQ SVVEKLVHLV 180
181 RTGPTSTKKD ALAALLTLAG ERENVGKLVD AGVAEVALSA ISKEETAAAV LAALAKRGGA 240
241 EAIVNIDGAV ARLVAEMRRG TDWARENATA ALVLLCRRLG APAVTQVMAV PGVEWAIWEL 300
301 MSIGTERARR KAASLGRICR RWAAASAADG ERGGGCPVAT VVPPAMMAS
|
| Detection Method: | |
| Confidence: | 39.69897 |
| Match: | 2jdqA |
| Description: | No description for 2jdqA was found. |
