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Protein Overview: gi|46800552

General Information:
Name(s) found: gi|46800552 [NCBI NR]
Description(s) found:
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  • gi|46800552|emb|CAG25720.2| plectin [Rattus norvegicus] [NCBI NR]
  • plectin [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Plectin [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • Tax_Id=10116 PLECTIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Plec1 Plectin (Fragment) [rat-ipi-250309-contam.fasta]
  • Plectin (Fragment) OS=Rattus norvegicus GN=Plec [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 1646 amino acids

    Gene Ontology:
    Cellular Component: insoluble fraction [UNKNOWN]
    basal plasma membrane [IDA]
    cytoskeleton [IEA]
    contractile fiber [UNKNOWN]
    perinuclear region of cytoplasm [IDA]
    cytoplasm [IEA]
    sarcolemma [IDA]
    cytosol [UNKNOWN]
    apical plasma membrane [IDA]
    Biological Process: epithelial cell differentiation [IEP]
    hemidesmosome assembly [UNKNOWN]
    female pregnancy [IEP]
    response to nutrient [IDA]
    Molecular Function: actin binding [IEA]
    protein N-terminus binding [IDA]
    structural constituent of cytoskeleton [IMP]
    cytoskeletal protein binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WMLQLCCCIE AHLKENTAYF QFFSDVREAE EQLQKLQETL RRKYSCDRSI TVTRLEDLLQ  60
   61 DAQDEKEQLN EYKGHLSGLA KRAKAIVQLK PRNPAHPVRG HVPLLAVCDY KQVEVTVHKG 120
  121 DQCQLVGPAQ PFHWKVLGGS SSEAAVPSVC FLVPPPNQEA QEAVARLEAQ HQALVTLWHQ 180
  181 LHVDMKSLLA WQSLNRDIQL IRSWSLVTFR TLKPEEQRQA LRNLELHYQA FLRDSQDAGG 240
  241 FGPEDRLVAE REYGSCSRHY QQLLQSLEQG EQEESRCQRC ISELKDIRLQ LEACETRTVH 300
  301 RLRLPLDKDP ARECAQRIAE QQKAQAEVEG LGKGVARLSA EAEKVLALPE PSPAAPTLRS 360
  361 ELELTLGKLE QVRSLSAIYL EKLKTISLVI RSTQGAEEVL KTHEEHLKEA QAVPATLQEL 420
  421 EVTKASLKKL RAQAEAQQPV FNTLRDELRG AQEVGERLQQ RHGERDVEVE RWRERVTQLL 480
  481 ERWQAVLAQT DVRQRELEQL GRQLRYYRES ADPLSSWLQD AKSRQEQIQA VPIANSQAAR 540
  541 EQLRQEKALL EEIERHGEKV EECQKFAKQY INAIKDYELQ LITYKAQLEP VASPAKKPKV 600
  601 QSGSESVIQE YVDLRTRYSE LTTLTSQYIK FISETLRRME EEEMQTVQQE QILQETQALQ 660
  661 KSFLSEKDSL LQRERFIEQE KAKLEQLFQD EVAKAKQLQE EQQRQQQQME QEKQELVASM 720
  721 EEARRRQREA EEGVRRKQEE LQRLEQQRQQ QEKLLAEENQ RLRERLQRLE EEHRAALAHS 780
  781 EEIATSQAAA TKALPNGRDA LDGPSMEAEP EYTFEGLRQK VPAQQLQEAG ILSMEELQRL 840
  841 TQGHTTVAEL TQREDVHRYL KGGSSIAGLL LKPTNEKLSV YTALQRQLLS PGTALILLEA 900
  901 QAASGFLLDP VRNRRLTVNE AVKEGVVGPE LHHKLLSAER AVTGYKDPYT GEQISLFQAM 960
  961 KKDLIVRDHG IRLLEAQIAT GGIIDPVHSH RVPVDVAYQR GYFDEEMNRV LADPSDDTKG1020
 1021 FFDPNTHENL TYLQLLERCV EDPETGLRLL PLTDKAAKGG ELVYTDTEAR DVFEKATVSA1080
 1081 PFGKFQGKTV TIWEIINSEY FTAEQRRDLL RQFRTGRITV EKIIKIVITV VEEHERKGQL1140
 1141 CFEGLRALVP AAELLDSGVI SHEVYQQLQR GERSVREVAE ADEVRQALRG TSVIAGVWLE1200
 1201 EAGQKLSIYE ALRRDLLQPE VAVALLEAQA GTGHIIDPAT SARLTVDEAV RAGLVGPEMH1260
 1261 EKLLSAEKAV TGYRDPYSGQ SVSLFQALKK GLIPREQGLR LLDAQLSTGG IVDPSKSHRV1320
 1321 PLDVAYARGY LDKETNRALT SPRDDARVYL DPSTREPVTY SQLQQRCRSD QLTGLSLLPL1380
 1381 SEKAVRARQE EVYSELQARE TLEKAKVEVP VGGFKGRALT VWELISSEYF TEEQRQELLR1440
 1441 QFRTGKVTVE KVIKILITIV EEVETQRQER LSFSGLRAPV PASELLASKI LSRTQFEQLK1500
 1501 DGKTSVKDLS EVGSVRTLLQ GSGCLAGIYL EDSKEKVTIY EAMRRGLLRP STATLLLEAQ1560
 1561 AATGFLVDPV RNQRLYVHEA VKAGVVGPEL HEKLLSAEKA VTGYKDPYSG STISLFQAMK1620
 1621 KGLVLRDHAI RLLEAQIATG GIIDPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle