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Protein Overview: gi|50928385, gi|...

General Information:
Name(s) found: gi|50928385 [NCBI NR]
gi|38346722 [NCBI NR]
gi|125591463 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|50928385|ref|XP_473720.1| OSJNBa0086O06.20 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38346722|emb|CAE04872.2| OSJNBa0086O06.20 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|125591463|gb|EAZ31813.1| hypothetical protein OsJ_015296 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 362 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALDTLCSAG GDVLIYDTFN ASAAAAAAVV PPASFLFGNN NAGGAAGTET RVQVAAGAVP  60
   61 EVDQLLKQAQ QPGRRKRRRR ARSCKSREDA ESQRMTHIAV ERNRRRQMNE YLAVLRSLMP 120
  121 ESYVHRGDQA SIVGGAIDFV KELEQLLQSL EAQKRTLLMQ PPPPPQQQRE PKCDAADSTS 180
  181 AADQETPAAA AAAAAADGPP FARFFTYPQY VWCHNPAQDG GGGGGAAAEN RAGVADIEVS 240
  241 LVETHASIRV MAARRPGQLL KMVAGLQALR LTVLHLNVTA LGSLALYSIS VKRFHGGKAI 300
  301 ASLGPLGVFF LCALYLWYST TVVEEGCGMA TVDDIAAAVH HVLCIIDAEA ASQMLLAGEA 360
  361 SG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] deduced N/A No confident structure predictions are available.
    2 View Details [83..233] PSI-BLAST 15.522879 Solution Structure of Max B-HLH-LZ
    3 View Details [234..303] MSA 1.274994 View MSA. No confident structure predictions are available.
    4 View Details [304..362] MSA 1.030988 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.12507195426228 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.43204604575196 bayes_pls_golite062009
  • DNA binding
    		•  0.40884226851256 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.31759335140578 bayes_pls_golite062009
  • transcription factor activity
    		•  0.09721565916723 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle