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Protein Overview: gi|50928147, gi|...

General Information:
Name(s) found: gi|50928147 [NCBI NR]
gi|38345533 [NCBI NR]
Description(s) found:
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  • gi|50928147|ref|XP_473601.1| OSJNBa0020J04.8 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38345533|emb|CAD41303.2| OSJNBa0020J04.8 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • OSJNBa0020J04.8 [Oryza sativa (japonica cultivar-group)]gi|38345533|emb|CAD41303.2| OSJNBa0020J04.8 [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • OSJNBa0020J04.8 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 1104 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPPRLLFL LVMLLVVAAP GAPVFGANAP PEVKAEIDAL LMFRSGLRDP YAAMSGWNAS  60
   61 SPSAPCSWRG VACAAGTGRV VELALPKLRL SGAISPALSS LTFDVSGNLL SGPVPVSFPP 120
  121 SLKYLELSSN AFSGTIPANV SASATSLQFL NLAVNRLRGT VPASLGTLQD LHYLWLDGNL 180
  181 LEGTIPSALS NCSALLHLSL QGNALRGILP PAVAAIPSLQ ILSVSRNRLT GAIPAAAFGG 240
  241 VGNSSLRIVQ VGGNAFSQVD VPVSLGKDLQ VVDLRANKLA GPFPSWLAGA GGLTVLDLSG 300
  301 NAFTGEVPPA VGQLTALQEL RLGGNAFTGT VPAEIGRCGA LQVLDLEDNR FSGEVPAALG 360
  361 GLRRLREVYL GGNSFSGQIP ASLGNLSWLE ALSTPGNRLT GDLPSELFVL GNLTFLDLSD 420
  421 NKLAGEIPPS IGNLAALQSL NLSGNSFSGR IPSNIGNLLN LRVLDLSGQK NLSGNLPAEL 480
  481 FGLPQLQYVS LAGNSFSGDV PEGFSSLWSL RHLNLSVNSF TGSMPATYGY LPSLQVLSAS 540
  541 HNRICGELPV ELANCSNLTV LDLRSNQLTG PIPGDFARLG ELEELDLSHN QLSRKIPPEI 600
  601 SNCSSLVTLK LDDNHLGGEI PASLSNLSKL QTLDLSSNNL TGSIPASLAQ IPGMLSLNVS 660
  661 QNELSGEIPA MLGSRFGTPS VFASNPNLCG PPLENECSAY RQHRRRQRLQ RLALLIGVVA 720
  721 ATVLLLVLFC CCCVYSLLRW RRRFIEKRDG VKKRRRSPGR GSGSSGTSTD SVSQPKLIMF 780
  781 NSRITYADTV EATRQFDEEN VLSRGRHGLV FKACYNDGTV LAILRLPSTS SDGAVVIEEG 840
  841 SFRKEAESLG KVKHRNLTVL RGYYAGPPPD VRLLVYDYMP NGNLATLLQE ASHQDGHILN 900
  901 WPMRHLIALG VSRGLAFLHQ SGVVHGDVKP QNILFDADFE PHLSDFGLEP MVVTAGAAAA 960
  961 AAAASTSATT TVGSLGYVAP DAAAAGQATR EGDVYSFGIV LLELLTGRRP GMFAGEDEDI1020
 1021 VKWVKRQLQR GAVAELLEPG LLELDPESSE WEEFLLGIKV GLLCTAPDPL DRPAMGDVVF1080
 1081 MLEGCRVGPD IPSSADPTSQ PSPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] deduced N/A No confident structure predictions are available.
    2 View Details [87..771] PSI-BLAST 62.0 No description for 3cigA was found.
    3 View Details [772..818] deduced N/A No confident structure predictions are available.
    4 View Details [819..1104] PSI-BLAST 48.045757 No description for 2qkwB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle