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Protein Overview: gi|115459864, gi...

General Information:
Name(s) found: gi|50927887 [NCBI NR]
gi|38345755 [NCBI NR]
gi|115459864 [NCBI NR]
gi|113565103 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|50927887|ref|XP_473471.1| OSJNBa0065O17.8 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38345755|emb|CAE03483.2| OSJNBa0065O17.8 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|115459864|ref|NP_001053532.1| Os04g0557800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113565103|dbj|BAF15446.1| Os04g0557800 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 574 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEETPLPSGK NFRSQLAAAA RSINWTYAIF WSISTSRPGV LTWKDGFYNG EIKTRKITNS  60
   61 MNLMADELVL QRSEQLRELY DSLLSGECGH RARRPVAALL PEDLGDTEWY YVVCMTYAFG 120
  121 PRQGLPGKSF ASNEFVWLTN AQSADRKLFH RALIAKSASI KTIVCVPFIM HGVLELGTTD 180
  181 PISEDPALVD RIAASFWDTP PRAAFSSEAG DADIVVFEDL DHGNAAVEAT TTTVPGEPHA 240
  241 VAGGEVAECE PNSDNDLEQI TMDDIGELYS LCEELDVVRP LDDDSSSWAV ADPWSSFQLV 300
  301 PTSSPAPDQA PAAEATDVDD VVVAALDSSS IDGSCRPSPS SFVAWKRTAD SDEVQAVPLI 360
  361 SGEPPQKLLK KAVAGAGAWM NNGDSSAAAM TTQGSSIKNH VMSERRRREK LNEMFLILKS 420
  421 VVPSIHRVDK ASILAETIAY LKELEKRVEE LESSSQPSPC PLETRSRRKC REITGKKVSA 480
  481 GAKRKAPAPE VASDDDTDGE RRHCVSNVNV TIMDNKEVLL ELQCQWKELL MTRVFDAIKG 540
  541 VSLDVLSVQA STSDGLLGLK IQAKFASSAA VEPG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..233] FFAS03 1.34 Crystal structure of an hypothetical protein
    2 View Details [234..349] deduced N/A No confident structure predictions are available.
    3 View Details [350..476] PSI-BLAST 17.39794 Myc prot-oncogene protein
    4 View Details [477..574] FFAS03 1.04 ACT domain protein from Streptococcus pneumoniae

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  1.12507195426228 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.43204604575196 bayes_pls_golite062009
  • DNA binding
    		•  0.40884226851256 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.31759335140578 bayes_pls_golite062009
  • transcription factor activity
    		•  0.09721565916723 bayes_pls_golite062009
    4
    Term Confidence Notes
  • catalytic activity
    		•  0.0923752113053079 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle