| Protein: | gi|115459864, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 574 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115459864, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
533.0 | [0..1] | [574..1] |
|
Region A: Residues: [1-233] |
1 11 21 31 41 51
| | | | | |
1 MEETPLPSGK NFRSQLAAAA RSINWTYAIF WSISTSRPGV LTWKDGFYNG EIKTRKITNS 60
61 MNLMADELVL QRSEQLRELY DSLLSGECGH RARRPVAALL PEDLGDTEWY YVVCMTYAFG 120
121 PRQGLPGKSF ASNEFVWLTN AQSADRKLFH RALIAKSASI KTIVCVPFIM HGVLELGTTD 180
181 PISEDPALVD RIAASFWDTP PRAAFSSEAG DADIVVFEDL DHGNAAVEAT TTT
|
| Detection Method: |  |
| Confidence: | 1.34 |
| Match: | 1vhmA |
| Description: | Crystal structure of an hypothetical protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [234-349] |
1 11 21 31 41 51
| | | | | |
1 VPGEPHAVAG GEVAECEPNS DNDLEQITMD DIGELYSLCE ELDVVRPLDD DSSSWAVADP 60
61 WSSFQLVPTS SPAPDQAPAA EATDVDDVVV AALDSSSIDG SCRPSPSSFV AWKRTA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [350-476] |
1 11 21 31 41 51
| | | | | |
1 DSDEVQAVPL ISGEPPQKLL KKAVAGAGAW MNNGDSSAAA MTTQGSSIKN HVMSERRRRE 60
61 KLNEMFLILK SVVPSIHRVD KASILAETIA YLKELEKRVE ELESSSQPSP CPLETRSRRK 120
121 CREITGK
|
| Detection Method: | |
| Confidence: | 17.39794 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
|
Region A: Residues: [477-574] |
1 11 21 31 41 51
| | | | | |
1 KVSAGAKRKA PAPEVASDDD TDGERRHCVS NVNVTIMDNK EVLLELQCQW KELLMTRVFD 60
61 AIKGVSLDVL SVQASTSDGL LGLKIQAKFA SSAAVEPG
|
| Detection Method: | |
| Confidence: | 1.04 |
| Match: | 1zpvA |
| Description: | ACT domain protein from Streptococcus pneumoniae |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.0923752113053079 | bayes_pls_golite062009 |
