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Protein Overview: gi|7438130

General Information:
Name(s) found: gi|7438130 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • pir||S74380 biotin carboxylase accC - Synechocystis sp. (strain PCC 6803) [NCBI NR]
    • Organism: Synechocystis sp.
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFAKILIAN RGEIALRIIH SCEELGIPTV AVHSTIDRHA LHVQLANESV CIGPPPSNKS  60
   61 YLNIPNIIAA ALTRNATAIH PGYGFLAENA RFAEICADHQ ITFIGPSPEA ITAMGDKSTA 120
  121 KKTMQKSGVP CVPGSPGLIE SEATALKIAA EIGYPVIIKA TAGGGGRGMR LVQEEKDFLK 180
  181 LFHAAQGEAG AAFGNPGVYL EKFIEKPRHI EFQILADSHG NVVHLGERDC SIQRRHQKLL 240
  241 EEAPSPFLTP HLRKKMGEAA VKAAKSINYV GAGTVEFLVD GNGNFYFMEM NTRIQVEHPV 300
  301 TEMITGYDLI SEQIRIAMGE KLRFRQSDVE IRGHAIECRI NAEDPKQNFR PHPGKISAYL 360
  361 PPGGPGVRID SHVYTDYEIP PYYDSLIGKL IVWAGDRPSA IKRMQRALRE CAITGVPTTL 420
  421 EFHQRILQTP AFLAGDVYTN FIEEHLTP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..448] PSI-BLAST 126.0 Crystal structure of the biotin carboxylase subunit of pyruvate carboxylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • CoA carboxylase activity
    		•  9.83581323285097 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  9.81059565938621 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  9.76633430002009 bayes_pls_golite062009
  • ligase activity
    		•  7.71401892529536 bayes_pls_golite062009
  • biotin carboxylase activity
    		•  6.9547407447638 bayes_pls_golite062009
  • carbamoyl-phosphate synthase activity
    		•  4.25267317906061 bayes_pls_golite062009
  • carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
    		•  4.17451795830682 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  3.45358843752722 bayes_pls_golite062009
  • catalytic activity
    		•  2.5009559386228 bayes_pls_golite062009
  • phosphoribosylaminoimidazole carboxylase activity
    		•  1.57708889650281 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  1.11645327303429 bayes_pls_golite062009
  • phosphoribosylamine-glycine ligase activity
    		•  1.04915286326924 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  0.695070201354335 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle