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Protein Overview: gi|1001439, gi|1...

General Information:
Name(s) found: gi|16331265 [NCBI NR]
gi|1001439 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|16331265|ref|NP_441993.1| uroporphyrin-III synthase [Synechocystis sp. PCC 6803] [NCBI NR]
  • gi|1001439|dbj|BAA10063.1| uroporphyrin-III synthase [Synechocystis sp. PCC 6803] [NCBI NR]
    • Organism: Synechocystis sp. PCC 6803
    Length: 538 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKLPHPQC LGVPGRSPRR ESNLIFTMLS TDSRAKVYLM GAGLGPVAYL TQRAIAVLGR  60
   61 ANVVIYDALV SQELFDLLPP DCERIFVGKR GGQPSTPQAK INQLLVDHYR RGKQVVRLKS 120
  121 GDPWIFGRIM PELATLVTHH CAYEVVPGIS SAIAGAGLAS IPLTAKDSGA GFFVMDGHDP 180
  181 HRWPWPALAQ LPTLVILMGT KNLSLLVNEL VRAGKSPHTP MAVIKNAGRP EQQTWEGTLA 240
  241 DMVEKTQGQS LAPAVIVIGD VVSQRIIPAL PPLPLTEKTI LVTRAADQAS QFTELLHQQG 300
  301 ATVLAMAALE IVPPKDWQPL DQAIAKLGDF DWLILTSANG VEFFFQRLQH HGLDSRALAG 360
  361 LKLAVVGKKT AQSLEKFGLK PDFIPPDFIA DALVEHFPHS PAGLKILFPR VESGGRAQLV 420
  421 QELSQKQALV TEVPSYQSAC PGHMPEEVWQ SIVNQTVDVI TFASSKTVSH FRQLLAQTSQ 480
  481 ANGYQDWRSL INHCQIASIG PQTSERCLRE LGRVDIEATE YTLEGLTGAI TNYVYQNP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..274] PSI-BLAST 64.09691 Structure and function of CysG, the multifunctional methyltransferase/dehydrogenase/ferrochelatase for siroheme synthesis
    2 View Details [275..538] PSI-BLAST 37.69897 Uroporphyrinogen III synthase (U3S, HemD)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • uroporphyrin-III C-methyltransferase activity
    		•  3.573271502205 bayes_pls_golite062009
  • C-methyltransferase activity
    		•  3.35393353163232 bayes_pls_golite062009
  • precorrin-4 C11-methyltransferase activity
    		•  2.18371138649366 bayes_pls_golite062009
  • catalytic activity
    		•  1.48349578618275 bayes_pls_golite062009
  • transferase activity
    		•  0.912524944496351 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.431791521097299 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.424918406685891 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.28351517300952 bayes_pls_golite062009
  • uroporphyrinogen-III synthase activity
    		•  0.00871858903098705 bayes_pls_golite062009
    2
    Term Confidence Notes
  • uroporphyrinogen-III synthase activity
    		•  3.34629127241283 bayes_pls_golite062009
  • catalytic activity
    		•  1.13824203225664 bayes_pls_golite062009
  • lyase activity
    		•  0.352588988142348 bayes_pls_golite062009
  • hydro-lyase activity
    		•  0.290711782955013 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.212880565996123 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle