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Protein Overview: gi|25288830

General Information:
Name(s) found: gi|25288830 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • pir||E87547 3-oxoadipate CoA-transferase, beta subunit [imported] - Caulobacter crescentus [NCBI NR]
    • Organism: Caulobacter vibrioides
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWTRDEMAA RAARELKNGF YVNLGIGIPT LVANHIPEGV HVTLQSENGM LGMGPFPYED  60
   61 EADPDLINAG KQTITKLPTS SFFDSAQSFA MIRGGHIDLT VLGAMEVAQN GDIANWTIPG 120
  121 KMVKGMGGAM DLVAGVKRVI VVMDHANKAG QSKVLKRCAL PLTGAACVDM VITDLCVFDL 180
  181 DRKGGGLTLI ELAPEVTLDE VKAKTAADFD AGAFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 64.522879 Succinate:CoA transferase, N-terminal domain; Succinate:CoA transferase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-oxoacid CoA-transferase activity
    		•  2.22792536321983 bayes_pls_golite062009
  • catalytic activity
    		•  1.68776709414398 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  0.53789410984028 bayes_pls_golite062009
  • CoA-transferase activity
    		•  0.50782945985068 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.26901752706112 bayes_pls_golite062009
  • transferase activity, transferring sulfur-containing groups
    		•  0.18413827683017 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle