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Protein Overview: gi|30260238, gi|...

General Information:
Name(s) found: gi|30260238 [NCBI NR]
gi|30253559 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30260238|ref|NP_842615.1| endoribonuclease L-PSP, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30253559|gb|AAP24101.1| endoribonuclease L-PSP, putative [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 124 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: mRNA catabolic process [ISSLink to PubMed article]
    Molecular Function: endoribonuclease activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVVQTNNAP QAIGPYSQGI IVNNMFYSSG QIPLTASGEL VAGDVTVQTE QVFQNLQAVL  60
   61 EEAGASFDTV VKTTVFLKDM DDFNAVNEVY GSYFSAHKPA RSCVQVAKLP KDVSVEIEVI 120
  121 ALVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] PSI-BLAST 43.221849 Purine regulatory protein YabJ

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribonuclease activity
    		•  5.19435575508494 bayes_pls_golite062009
  • endoribonuclease activity
    		•  3.76425533948565 bayes_pls_golite062009
  • endonuclease activity
    		•  3.57078287701774 bayes_pls_golite062009
  • nuclease activity
    		•  1.95684086528131 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.90373737530073 bayes_pls_golite062009
  • binding
    		•  1.87868720745411 bayes_pls_golite062009
  • hydrolase activity
    		•  1.86428296839828 bayes_pls_golite062009
  • catalytic activity
    		•  1.00848565859536 bayes_pls_golite062009
  • protein binding
    		•  0.378484263251583 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle