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Protein Overview: gi|30256552, gi|...

General Information:
Name(s) found: gi|30261926 [NCBI NR]
gi|30256552 [NCBI NR]
Description(s) found:
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  • gi|30261926|ref|NP_844303.1| deoxyribose-phosphate aldolase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30256552|gb|AAP25789.1| deoxyribose-phosphate aldolase [Bacillus anthracis str. Ames] [NCBI NR]
  • deoxyribose-phosphate aldolase [Bacillus cereus ZK]gi|51976999|gb|AAU18549.1| deoxyribose-phosphate aldolase [Bacillus cereus ZK]gi|49481148|ref|YP_036064.1| deoxyribose-phosphate aldolase [Bacillus thuringiensis serovar konkukian str. 97-27]gi|4918476 [nrdb_11152004_Chlamydomonas]
  • deoxyribose-phosphate aldolase [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 223 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: deoxyribonucleotide catabolic process [ISSLink to PubMed article]
    Molecular Function: deoxyribose-phosphate aldolase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIAKLIDHT ILKANTTKED VMKVIEEAKE YKFASVCINP TWVKLAAEEL AGHDVDVCTV  60
   61 IGFPLGASTT ETKAFETKDA IAKGATEVDM VINVGALKDG DNELVEKDIY EVVQAAKGKA 120
  121 LVKVIIETCL LTDEEKVRAC ELSVKAGADF VKTSTGFSTG GATAEDIALM RKTVGPNVGV 180
  181 KASGGVRTRE DAEKMVAAGA SRVGASASVA IVLNDAKGAT DNY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..223] PSI-BLAST 51.221849 Deoxyribose-phosphate aldolase DeoC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  3.04075198078553 bayes_pls_golite062009
  • deoxyribose-phosphate aldolase activity
    		•  2.53712494800381 bayes_pls_golite062009
  • transaldolase activity
    		•  0.657551083859431 bayes_pls_golite062009
  • lyase activity
    		•  0.437176828950096 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  0.41660515357045 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  0.270307871677629 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle