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Protein Overview: gi|30263802, gi|...

General Information:
Name(s) found: gi|30263802 [NCBI NR]
gi|30258446 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30263802|ref|NP_846179.1| dihydrodipicolinate synthase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30258446|gb|AAP27665.1| dihydrodipicolinate synthase [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 292 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lysine biosynthetic process via diaminopimelate [ISSLink to PubMed article]
    Molecular Function: dihydrodipicolinate synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDFGTIATA MVTPFDINGN IDFAKTTKLV NYLIDNGTTA IVVGGTTGES PTLTSEEKVA  60
   61 LYRHVVSVVD KRVPVIAGTG SNNTHASIDL TKKATEVGVD AVMLVAPYYN KPSQEGMYQH 120
  121 FKAIAESTPL PVMLYNVPGR SIVQISVDTV VRLSEIENIV AIKDAGGDVL TMTEIIEKTA 180
  181 DDFAVYSGDD GLTLPAMAVG AKGIVSVASH VIGNEMQEMI AAFQAGEFKK AQKLHQLLVR 240
  241 VTDSLFMAPS PTPVKTALQM VGLDVGSVRL PLLPLTEEER VTLQSVMQSI PR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..292] PSI-BLAST 100.0 Crystal Structure of Dihydrodipicolinate Synthase DapA-2 (BA3935) from Bacillus Anthracis at 1.94A Resolution.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.67031204377352 bayes_pls_golite062009
  • 3-deoxy-7-phosphoheptulonate synthase activity
    		•  2.02591266233154 bayes_pls_golite062009
  • fructose-bisphosphate aldolase activity
    		•  1.7625405035454 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  1.72893315846141 bayes_pls_golite062009
  • transaldolase activity
    		•  1.38790063456575 bayes_pls_golite062009
  • lyase activity
    		•  0.740424046054758 bayes_pls_golite062009
  • transferase activity
    		•  0.464721888799972 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  0.351872954170322 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle