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Protein Overview: gi|30264298, gi|...

General Information:
Name(s) found: gi|30264298 [NCBI NR]
gi|30258943 [NCBI NR]
Description(s) found:
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  • gi|30264298|ref|NP_846675.1| glycine dehydrogenase subunit 2 [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30258943|gb|AAP28161.1| glycine cleavage system P protein, subunit 2 [Bacillus anthracis str. Ames] [NCBI NR]
  • possible glycine dehydrogenase subunit 2, glycine cleavage system P-protein subunit 2 [Bacillus cereus ZK]gi|51974740|gb|AAU16290.1| possible glycine dehydrogenase subunit 2, glycine cleavage system P-protein subunit 2 [Bacillus cereus ZK]gi|49480639|re [nrdb_11152004_Chlamydomonas]
  • glycine cleavage system P protein, subunit 2 [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
  • glycine dehydrogenase subunit 2 [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 491 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycine decarboxylation via glycine cleavage system [ISSLink to PubMed article]
    Molecular Function: glycine dehydrogenase (decarboxylating) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNQDQALIF EVSKEGRIGY SLPKLDVEEV KLEDVFESDY IRVEDAELPE VSELDIMRHY  60
   61 TALSNRNHGV DSGFYPLGSC TMKYNPKINE SVARFAGFAN IHPLQDEKTV QGAMELMYDL 120
  121 QEHLIEITGM DTVTLQPAAG AHGEWTGLML IRAYHEANGD FNRTKVIVPD SAHGTNPASA 180
  181 TVAGFETITV KSNEHGLVDL EDLKRVVNEE TAALMLTNPN TLGLFEENIL EMAEIVHNAG 240
  241 GKLYYDGANL NAVLSQARPG DMGFDVVHLN LHKTFTGPHG GGGPGSGPVG VKADLIPYLP 300
  301 KPILEKTENG YHFNYDRPEA IGRVKPFYGN FGINVRAYTY IRSMGPDGLR AVTEYAVLNA 360
  361 NYMMRRLAPF YDLPFDRHCK HEFVLSGRRQ KKLGVRTLDI AKRLLDFGYH PPTIYFPLNV 420
  421 EECIMIEPTE TESKETLDGF IDKMIQIAKE VEENPEVVQE APHTTVIKRL DETMAARKPV 480
  481 LRYAKPAPVQ V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..491] PSI-BLAST 72.09691 Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in apo form

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.66922865456094 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  2.10290066978837 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  2.10290066978837 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.85532625717753 bayes_pls_golite062009
  • transaminase activity
    		•  1.83482013760414 bayes_pls_golite062009
  • transferase activity
    		•  0.93810038069762 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.71980637947887 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.58373273750311 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.51745245786841 bayes_pls_golite062009
  • O-phospho-L-serine:2-oxoglutarate aminotransferase activity
    		•  0.38671377495281 bayes_pls_golite062009
  • lyase activity
    		•  0.0414385380659299 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle